Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0096 ATGAAGGTGGTTGAGCTTGTATTTCTGATGTTAAGAATGGTTGTGACCTTATGCTTCTTGCTCGGTGCCTCCTCTCAGAATACCTCACCTACACCTAGAAGAGGTTTAAGGGGTGCCAACACCTTAGGATCTGGTCCTTCTCCGGTCACTCTGGATACACAAAACCCTCATCAGGTGGTAATTCAAAATGGCATTGTGTCCGTCACATTGGCAAATCCGGAGGGCCATATTCTTGGAATATCATATAATAATGGACAAGACAACCTTCTTGAAGCTTCAAATGCAAAATACGATAGAGGCTACGTGGACGTTGTTTGGAATAAACCTGGACAGACTAGCAGCGAATTCTCCAGAATAGATGGAACGAGATTTTCAGTGATCGTAGCGAACAGGAATATAGTGGAGGTTTCTTTCTCAAGAATGTGGACACCTGCGGATGCCTCAAATATCCCCGTAAACACAGACACAAGGTATATAGTGCGAAAAGGCGACTCCGGGTTTTATTCATACGTAATATTCGACCGACCAGAAGGATTCCCTGCAGTGGAAATTGATCAAGTTAGGATTGTTTACAAGCTCAACACTGAAAGGTTCCATTACATGGCGATAACAAATAGTAGGCAAAGAGGTATGCCAACGATGAGGGATAGAGAAACGGGTGAACCCCTTGCTTATCCGGAAGCTGTTCTCTTGACTAAGCCATCAAATCCACGATTTAAGGGAGAGGTGGATGACAAATACCAATACTCGATTGAGAACCAAGATAACAGTGTTCACGGATGGATTACCGTAGATTCCCAACCACCCGTGGGCTTCTGGGTCATTACGCCCACCAACGAGTTCCGCAATGCTGGGCCCATTAAGCAAGACCTCACCTCTCATGTTGGCCCATTTGCCCTCTCCATGTTTGTGAGCAACCACTATGCTGGGAGGCGTGTGAGCATGGTGTTTAAACAAGGGGAGACATATAATAAGGTGTTTGGACCCGTTTTGATCTACCTCAACTCTGCCTCTTCTACCAACACTAGTACTACTTTCAATCACTTGTGGTCAGATGCGGTACAAAAGAAATCCAATGAGGTCAGCAGCTGGCCTTACAATTTCCCTCTATCAACCGATTTCGTTCCCGCCAATAAACGTGGAACAGTAACAGGATGCTTACTAGTCCAAGATAGGTTCATCCAGGGAAAGACACTTCAATATGCTAACAATGCTCACATTGGTCTTGCTCTGCCTGGAGATCCCGGATCATGGCAGAAAGAAAGCAAGGGTTATCAATTCTGGAGTCGAACCGACGGGAATGGGAACTTCATAATAAAAAACATTGTACCTGGGAGCTATAATTTGTATGCATGGGTTCCTGGCTTTATTGGAGATTACAGATATAATAGTACAATCACCATCACACCGGGATGCTCCATCAAGCTGGGTTCAATTGTATATAGTCCTCCAAGAAATGGTCCTACTCTTTGGGAAATTGGCATCCCTGATCGCAGTGCTGCTGAATTCTATGTGCCAAACGCATACCCCAACCTAATCAACAAATTGTACCTCAATGACAGGACAGACGATTTTAGACAATACGGGCTGTGGGAAAGGTACACTGATTTATATCCAAAGGCTGATCTTGTATTCACAGTTGGTGTTAGTGACTATAGAAAACATTGGTTTTTCGCTCATGTTACAAGGAAAATAGGAGATAAGAGCTACAACTCAACGACGTGGCAGACTGTATTTGTGCTTCAAAACGTGATACCCACTGGAACTTACACTCTGCAATTGGCATTGGCGTCCTCCTCTGAAGCTGAAATCCAGGTCCGGTTGAATGACCCGAATGCAAAGGCTCCACTGTTCACAACAGGGCTAATAGGGGAAGACAATGCCATATCGAGGCACGGGATTCACGGCTTGCACAGCTTGTTCAGCATAGCATTAGGTGGCAATCATTTGGTCAAAGGAAAAAATGTAATCTATCTGAGGCAAGCAAGAACCACTTCTCCTTTCGATGGAGTCATGTATGATTATATTCGACTAGAAGCTCCTCCAACTCCAACTCCAACTACTACTACTTGA 2073 0.4457 MKVVELVFLMLRMVVTLCFLLGASSQNTSPTPRRGLRGANTLGSGPSPVTLDTQNPHQVVIQNGIVSVTLANPEGHILGISYNNGQDNLLEASNAKYDRGYVDVVWNKPGQTSSEFSRIDGTRFSVIVANRNIVEVSFSRMWTPADASNIPVNTDTRYIVRKGDSGFYSYVIFDRPEGFPAVEIDQVRIVYKLNTERFHYMAITNSRQRGMPTMRDRETGEPLAYPEAVLLTKPSNPRFKGEVDDKYQYSIENQDNSVHGWITVDSQPPVGFWVITPTNEFRNAGPIKQDLTSHVGPFALSMFVSNHYAGRRVSMVFKQGETYNKVFGPVLIYLNSASSTNTSTTFNHLWSDAVQKKSNEVSSWPYNFPLSTDFVPANKRGTVTGCLLVQDRFIQGKTLQYANNAHIGLALPGDPGSWQKESKGYQFWSRTDGNGNFIIKNIVPGSYNLYAWVPGFIGDYRYNSTITITPGCSIKLGSIVYSPPRNGPTLWEIGIPDRSAAEFYVPNAYPNLINKLYLNDRTDDFRQYGLWERYTDLYPKADLVFTVGVSDYRKHWFFAHVTRKIGDKSYNSTTWQTVFVLQNVIPTGTYTLQLALASSSEAEIQVRLNDPNAKAPLFTTGLIGEDNAISRHGIHGLHSLFSIALGGNHLVKGKNVIYLRQARTTSPFDGVMYDYIRLEAPPTPTPTTTT* 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0096 690 CDD RGL4_N 58 334 - -
Aev05g0096 690 Pfam Polysaccharide lyase family 4, domain III 489 678 IPR029411 -
Aev05g0096 690 MobiDBLite consensus disorder prediction 27 53 - -
Aev05g0096 690 SUPERFAMILY Galactose mutarotase-like 53 352 IPR011013 GO:0003824|GO:0005975|GO:0030246
Aev05g0096 690 CDD RGL4_C 491 679 - -
Aev05g0096 690 SUPERFAMILY Galactose-binding domain-like 486 679 IPR008979 -
Aev05g0096 690 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 53 682 - -
Aev05g0096 690 SUPERFAMILY Starch-binding domain-like 375 476 IPR013784 GO:0030246
Aev05g0096 690 CDD RGL4_M 379 479 IPR029413 -
Aev05g0096 690 Gene3D - 375 476 - -
Aev05g0096 690 Gene3D - 51 354 IPR014718 GO:0030246
Aev05g0096 690 Gene3D - 487 679 - -
Aev05g0096 690 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 53 682 - -
Aev05g0096 690 Pfam Rhamnogalacturonate lyase family 49 243 IPR010325 -
Aev05g0096 690 Pfam Polysaccharide lyase family 4, domain II 404 475 IPR029413 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0096 Aev-Chr5 741851 754311 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0096 57 681 Polysaccharide Lyase AT1G09890 54.140 0.0 697
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0096 K18195 - gmx:100776664 896.73