LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev05g0080	ATGCAGAGGGTAGAGAAGAGGAAGAAAAACCCAGAAATGGTATTGAAAGGTGATCACGGAAAAGAGTTTTCGAGCGACGATGAGGGTTCTCCGAGAGGGGTATTAGAGACCCCTGTCTCGGGAACAGAGTCCGACACCGGCAGCGGAAGCAGCAGCAGCAGCTTCTCGCCGGAGAAGTTACCGCCGCCGCCATCTTCGGCACGTGCTGGTGGGAAGGAAGGGCACGTGCAGCAATGGAGGTCGATGATCGAGGTGTTCAACTTGAAGTTCAAGTCAGTAAGGAAATTAACGACGATTCCTCTGCTTGCTGCGGGGCATGATAGCAGTAGGAAGGGATTGACGAAGAAGCTTGCTCGAATTCGAAGCGCCGAAGATAACATCGATATCATTGGTGCCATTCCTACGAAACCCTCTTGGAGGAACTTCGACTACGCAGAGCTCGTCGCAGCTACTAATGATTTCTCTTCAGAGAACATGGTTGGTAAAGGTGGTCATGCAGAAGTGTACAGGGGACACCTACCTGATGGCCAAGTTATAGCAGTAAAGAGGCTAATGAAGAATGACAAAGATGCTGGTGACAGAGCTGGTGATTTCTTGACTGAACTTGGCATCATTGCACACATTAACCACCGGAATGCGACGCGCCTTGTCGGCTTTGGGATCGAATGTGGCCTCTACTTCGTCCTCGAATATGCTCCACATGGCAGCCTCTCTTCTTTGCTCTTTGGTTCTGAATGCTTGGAGTGGAAGGTAAGGTTCCAGGTAGCTATTGGGGTGGCAGAGGGATTGCATTATCTTCATGAAGATTGCCCAAGAAGAATCATTCACAGAGACATCAAAGCCTCCAACATATTACTTAATGATAAGTTTGAAGCTGAGATTTCAGATTTTGGATTGGCAAAGTGGCTTCCAAGCAAGTGGGCTCAGCATGTTGTTTTCCCAATAGAAGGCACATTTGGTTATTTAGCTCCAGAGTACTTTATGCATGGAATTGTTGATGAGAAGACCGATGTATTCGCATTCGGGGTCTTGTTGCTGGAGATCATAACAGGTCGTCAAGCCGTCGATTCAGCTAGTAGGCAGAGTCTTGTGATCTGGGCTATGCCACTTCTTGATACAAACAATGTCAAGGGAATAGCAGACCCCAGATTAGGAGAGGAATATGATCCTGCTGAAATGAAGCGCGCCATGGTTACGGCTTCCTTGTGTGTCCACCAGATACCCTCCAAGAGGCCATACATGAATCAGGCAAGAAAATGA	1260	0.4817	MQRVEKRKKNPEMVLKGDHGKEFSSDDEGSPRGVLETPVSGTESDTGSGSSSSSFSPEKLPPPPSSARAGGKEGHVQQWRSMIEVFNLKFKSVRKLTTIPLLAAGHDSSRKGLTKKLARIRSAEDNIDIIGAIPTKPSWRNFDYAELVAATNDFSSENMVGKGGHAEVYRGHLPDGQVIAVKRLMKNDKDAGDRAGDFLTELGIIAHINHRNATRLVGFGIECGLYFVLEYAPHGSLSSLLFGSECLEWKVRFQVAIGVAEGLHYLHEDCPRRIIHRDIKASNILLNDKFEAEISDFGLAKWLPSKWAQHVVFPIEGTFGYLAPEYFMHGIVDEKTDVFAFGVLLLEIITGRQAVDSASRQSLVIWAMPLLDTNNVKGIADPRLGEEYDPAEMKRAMVTASLCVHQIPSKRPYMNQARK*	420

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Aev05g0080	419	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	274	286	IPR008271	GO:0004672\|GO:0006468
Aev05g0080	419	SUPERFAMILY	Protein kinase-like (PK-like)	129	418	IPR011009	-
Aev05g0080	419	ProSiteProfiles	Protein kinase domain profile.	154	419	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Aev05g0080	419	Gene3D	Phosphorylase Kinase; domain 1	117	231	-	-
Aev05g0080	419	SMART	serkin_6	154	414	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Aev05g0080	419	PANTHER	RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-KINASE	22	417	-	-
Aev05g0080	419	PANTHER	OS08G0249100 PROTEIN	22	417	-	-
Aev05g0080	419	Gene3D	Transferase(Phosphotransferase) domain 1	233	419	-	-
Aev05g0080	419	MobiDBLite	consensus disorder prediction	37	56	-	-
Aev05g0080	419	ProSitePatterns	Protein kinases ATP-binding region signature.	160	182	IPR017441	GO:0005524

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev05g0080	Aev-Chr5	634174	638322	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev05g0080	142	418	Trihelix Transcription Factor Family	AT1G68690	46.503	1.93e-72	238

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-VI	Aev05g0080		Pkinase	3.3e-37	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev05g0080	-		-	gmx:100818314	621.313

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