Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0079 ATGGCTCGTGCAACCAACTGGCTATCGTTTTCGCTGTCCCCAATGGAAATGCTAAGCTCCTCCGACCCACAGTTCCCCCAATACGACGCCGCTTCACCCAACAACACTACCACTACTACTACTACTACTACTACTACTACTACTCATCACCACCACTCCACCAACAGCAACTACTTCCTTGATAACTTCTACGGTTGGGGGAACCACCAGCACCAGGGAAAGGAACAGCAATCGCAGGCCATGGTGGAGCAGTCGCTTTTCCTCACCACCTACCTCGACTCCTCGCACAATCACCTCACCCACGCGCCGCCGCATGCCACCGTCCCCAAGCTCGAGGATTTTCTCGGCGATTCTTCCTCCTCCATGATGCGCTACTCCGACAGCCAGACCGAGACTCAGGATTCGTCCCTGACCACGCACATCTACGACCACGCCGCCTACTTCGGCGGTGGCGGTGCTGACCAGCAAGATCTGAAGGCCATTGCTGGCTTCCAGGCTTTCTCCGCCGCCAACTCGGGCTCCGAGGTGGACGACTCGGCCTCCATGGGCAGGGTGCAACAACAGAACGAGTTCGGGACTCGCTCCGTTGACTCGTCCGGGAACGAGTTGGCCTTCTCCGGGGGCGGCTGCACCGCCGCTACGGGAGGTTTGTCTCTCGGTGTGGCGCAGAGTTCAGAGAAAAGCGTGGCTGTGTCGGATTCCGATAGCTCGAAGAAGATCGGCGATACGTTCGGTCAGAGAACTTCAATTTACAGAGGAGTCACTAGACACCGATGGACGGGCAGATATGAAGCGCATCTATGGGATAACAGCTGTAGAAGAGAGGGTCAGGCCAGGAAAGGGCGTCAAGGTGGATATGACAAGGAAGAAAAAGCCGCGAGAGCTTATGATTTGGCAGCTCTAAAGTATTGGGGTCCCACAGCTACCACCAACTTCCCTGTTTCCAACTATACAAAGGAATTGGAGGAGATGAAGCATGTAACAAAGCAAGAATTCATTGCATCACTGAGAAGGAAAAGCAGTGGTTTTTCTAGGGGAGCTTCCATATACAGGGGTGTTACAAGGCATCATCAACAGGGTCGATGGCAAGCAAGAATTGGCCGCGTTGCCGGAAATAAGGATTTATACTTGGGAACATTTGCAACTGAAGAGGAAGCAGCAGAGGCATATGACATAGCAGCCATAAAGTTCAGAGGTGCAAATGCTGTGACAAATTTCGAGATGAGCAGGTACGACGTCGATGCCATTATGAAGAGTTCTCTCCCCGTCGGCGGCGCAGCGAAGCGCTTGAAGCTGTCCTTGGAATCGGAGCAGAAACCGGTTACTCTCACCACCTCCACAAGCACCCAACAGCAACCACAGTGTGCAAACATGAGTGGCAGCAGCATCAATTTCTCAGCAATTCACCAGCCAGTTGCCACAATCCCTTGCGGAATCCCGTTCGACTCTGCCGCGGCCGCCGCGTACTATCACCACAACCTCTTCCACCACTTTCATCCTACCACAGCAGAATCTGCCTTAACTTCAACAACAAATGCAGCAGCAGGATATGCTGCTCTGCCTCCACCACAAGCAGCAGCACCTGAGTTCTTCATATGGCCTCATCAGACATATTGA 1617 0.5343 MARATNWLSFSLSPMEMLSSSDPQFPQYDAASPNNTTTTTTTTTTTTTHHHHSTNSNYFLDNFYGWGNHQHQGKEQQSQAMVEQSLFLTTYLDSSHNHLTHAPPHATVPKLEDFLGDSSSSMMRYSDSQTETQDSSLTTHIYDHAAYFGGGGADQQDLKAIAGFQAFSAANSGSEVDDSASMGRVQQQNEFGTRSVDSSGNELAFSGGGCTAATGGLSLGVAQSSEKSVAVSDSDSSKKIGDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQGGYDKEEKAARAYDLAALKYWGPTATTNFPVSNYTKELEEMKHVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGANAVTNFEMSRYDVDAIMKSSLPVGGAAKRLKLSLESEQKPVTLTTSTSTQQQPQCANMSGSSINFSAIHQPVATIPCGIPFDSAAAAAYYHHNLFHHFHPTTAESALTSTTNAAAGYAALPPPQAAAPEFFIWPHQTY* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0079 538 CDD AP2 348 409 IPR001471 GO:0003700|GO:0006355
Aev05g0079 538 SUPERFAMILY DNA-binding domain 249 315 IPR016177 GO:0003677
Aev05g0079 538 MobiDBLite consensus disorder prediction 21 53 - -
Aev05g0079 538 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR AIL6 5 535 - -
Aev05g0079 538 MobiDBLite consensus disorder prediction 173 200 - -
Aev05g0079 538 ProSiteProfiles AP2/ERF domain profile. 250 313 IPR001471 GO:0003700|GO:0006355
Aev05g0079 538 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 5 535 - -
Aev05g0079 538 CDD AP2 249 315 IPR001471 GO:0003700|GO:0006355
Aev05g0079 538 SUPERFAMILY DNA-binding domain 348 409 IPR016177 GO:0003677
Aev05g0079 538 PRINTS Ethylene responsive element binding protein signature 251 262 IPR001471 GO:0003700|GO:0006355
Aev05g0079 538 PRINTS Ethylene responsive element binding protein signature 389 409 IPR001471 GO:0003700|GO:0006355
Aev05g0079 538 SMART rav1_2 349 413 IPR001471 GO:0003700|GO:0006355
Aev05g0079 538 SMART rav1_2 250 319 IPR001471 GO:0003700|GO:0006355
Aev05g0079 538 Gene3D AP2/ERF domain 250 315 IPR036955 GO:0003700|GO:0006355
Aev05g0079 538 Gene3D AP2/ERF domain 349 409 IPR036955 GO:0003700|GO:0006355
Aev05g0079 538 Pfam AP2 domain 250 305 IPR001471 GO:0003700|GO:0006355
Aev05g0079 538 Pfam AP2 domain 349 399 IPR001471 GO:0003700|GO:0006355
Aev05g0079 538 ProSiteProfiles AP2/ERF domain profile. 349 407 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0079 Aev-Chr5 627671 632222 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0079 85 538 AP2-EREBP Transcription Factor Family AT5G10510 58.444 5.52e-167 483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Aev05g0079 AP2 2e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0079 K09285 - gmx:100777168 690.263