Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0078 ATGGATGCAACAACAGAGAGGGAGAAAATCTATGTTGCTGTTGGTAATGATGTGCAGGAAGGATTCAATGCTCTGAGTTGGGTTCTCAATAAATGGAATTCAAGTCCAATTTCTATTGTGGTTCTTCATGTGACTCACAACATTTCCATGGATTATGTTTTCACACCATTTGGGAAGCTTCCAGCAAGTTCTGTGAATGATAAGAAGCTTGAAGTTCTCAGGAAATATGAGCAAGAGAAAATCAACAAGCAGTTCTCAAAGTATATTTCTTTCTGTGCCAACTTCAAGGTTCCAGCAGAAACTCATGAAGTTGAGAAATTTGATGATCCTATCCAAAAGCGCATCATAGACTTGATATTTGGTCTGGGAATTACAAAATTGGTCATGGCATTTTCATTCATGAAACCCTCCTTGAAGGCAAAAGGTGCCATTAGTGGATTATTCTATGTTCATCAGCACAAGCCATCATTCTGTGAACTGTTCATAATTTGTGGTGGGAAGCAAGTTTTTCTAAGAGGGAAAAATGATGAGAAAATCATGGAGGATGATAATGGGGTCATGGTTGCAAAGATGAGGGATAAGATAACTTTCAAAGATTGGTTAGAGAAAATGTTCAATGATAATAATAACAACAATAGTAATAAATCAAATGAAGAATCCCAAGATAGGTGTGGTTCAACATCATCATCACCGGTTACACAGAGTCAGTGGGAATTTTATCTGCAAGAGATTGAAAATTACTATCAAGAATTGATGACAATGTCTTCACCAAATTCAGAGGAAGGAGAAAGAAGAAGAAGAAGAAGCTGTGGACAAGACTGTGACAATGACGGCTCACATATTAGTCCAATTGAGCCATATGTCACAGAAAGTAACAATTCCAATAAGAGTGCTGCAGAGAAAATTGAGATGCTAGAAAATAAACTGAATGAAACTCACAGATCGATCCAATTGAGGAGAAGAGAAGCCAAAGATAATGCAGAGAGACACGCAAAAGCACAGTGGGCAATTTGCTTATGCAACTGTAGGGCTGAAGAACTTGAGACACGAATAAAGGAAGAAGTGTCGATAAGAGAAGAGGTAAATAAGGAACTTAATTCTGAAAGAGAGCAAACACATGACCTTAGAATTGATATCGAAGAGAGCAAGAGGAGGGTCACCTCACTCTCTGAGCTCCAATCCGAGCTCTCCAACAGGCTCCACGTGACCGCACTCGCCAAGTCACGTGCTGAGGCCCAGCTTCAAAGCACGGTTCACGAAAGAGCCCAAATGGTTAGGGAAATTGAAGAATTGAGGAGACAGAGGGAGGTGTTGAATAGAAGGATCGAGTTCTGTAAACAGAAAGATGCTATTGGGATTGCGGCGAGGATGAGCGATGTGTGTTGCGGTTTCAGGGAGTATTCGGAGGAGGAATTGAGGCTCGCTACGGACAATTTCTCGGAGAGGCTGAGACTCAAGAGTGGTGGTGATTGGAGTAATGTGTACAGAGGACGACTCAGTCATTCTACTGTTGCCATCAAGATGCTTACCAATTCTTTTCATGATCTGTCACAACATGATTTCCAATCTAAGGTGAGAGTTCTCGGTGACATTAGGCAACCTCATGTGGTTGCTATGGTGGGGTTTTGTGCTGAGCCCAAATGCATACTTATGGAGTACATGCACAACGGAAGCTTACGAGACATGCTCTTTTCTAGGAGAAGAAACCGGGCTCTAAAGTGGCATGACCGAATTCGAATAGCAATCGAAGTTTGCTCAGGCCTGGGCTTCCTCAATTCAGTAAGCCCGAGGCCGGCTTTTCATTGCCATTTGAGCCCAGCCAATGTACTCTTAGACCGCAATCTTGTTGCAAAGATAACGGGCTTTGGGCTTCACGAGTGCCGTGGAAAGGAATGTAATGGCGAGTCAGATATCCGGGCCTTAGGGGTTTTGCTGATGCAGCTTCTGACCGGTAGAAATTGGGCCGGGCTTGTTGAGGAGGCCTTGAAAGTGGACATGGACAGAGAAGCCTTGGTTGGGATTCTTGATGAGACCGCTGGGCCGTGGCCATTGAATCTGGCAAAAGAAATCGCGGGCCTGGCGATGAGGTGCATGTCCATGAAAGAGAGGCCCAATCAAGAGTTGAGCATTGGGAGGGTGATGGAGGAGCTGAAGGAGATAAGAAGAAAGGGAGATGAAATAGCATCGAGGGAAGGAAGAAGGGGGGTTATGGAAAGGGATGATAGCTGCAGTGATGTGCCTAGTGTTTTCCTCTGCCCTATTCTTCAGGATGTAATGAAGAACCCACACGTGGCAGCAGATGGTTTCTCATACGAGCTAGAAGCAATGGAACAGTGGTTGGAATCAGGGCATGAGACGTCACCAATGACAAACCTGAGGCTGAAGCACACAGTCCTCACCCCTAATCACACCCTTCGCTCCTTAATTCAAGACTGGCGTAGCAGCCACACAGTTTCTACAGCAAATCAATCATACCCATAA 2481 0.4414 MDATTEREKIYVAVGNDVQEGFNALSWVLNKWNSSPISIVVLHVTHNISMDYVFTPFGKLPASSVNDKKLEVLRKYEQEKINKQFSKYISFCANFKVPAETHEVEKFDDPIQKRIIDLIFGLGITKLVMAFSFMKPSLKAKGAISGLFYVHQHKPSFCELFIICGGKQVFLRGKNDEKIMEDDNGVMVAKMRDKITFKDWLEKMFNDNNNNNSNKSNEESQDRCGSTSSSPVTQSQWEFYLQEIENYYQELMTMSSPNSEEGERRRRRSCGQDCDNDGSHISPIEPYVTESNNSNKSAAEKIEMLENKLNETHRSIQLRRREAKDNAERHAKAQWAICLCNCRAEELETRIKEEVSIREEVNKELNSEREQTHDLRIDIEESKRRVTSLSELQSELSNRLHVTALAKSRAEAQLQSTVHERAQMVREIEELRRQREVLNRRIEFCKQKDAIGIAARMSDVCCGFREYSEEELRLATDNFSERLRLKSGGDWSNVYRGRLSHSTVAIKMLTNSFHDLSQHDFQSKVRVLGDIRQPHVVAMVGFCAEPKCILMEYMHNGSLRDMLFSRRRNRALKWHDRIRIAIEVCSGLGFLNSVSPRPAFHCHLSPANVLLDRNLVAKITGFGLHECRGKECNGESDIRALGVLLMQLLTGRNWAGLVEEALKVDMDREALVGILDETAGPWPLNLAKEIAGLAMRCMSMKERPNQELSIGRVMEELKEIRRKGDEIASREGRRGVMERDDSCSDVPSVFLCPILQDVMKNPHVAADGFSYELEAMEQWLESGHETSPMTNLRLKHTVLTPNHTLRSLIQDWRSSHTVSTANQSYP* 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0078 826 MobiDBLite consensus disorder prediction 208 231 - -
Aev05g0078 826 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 50-RELATED 6 814 - -
Aev05g0078 826 ProSiteProfiles Protein kinase domain profile. 480 720 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev05g0078 826 Coils Coil 288 322 - -
Aev05g0078 826 CDD RING-Ubox_WDSUB1_like 750 791 - -
Aev05g0078 826 SUPERFAMILY RING/U-box 740 817 - -
Aev05g0078 826 MobiDBLite consensus disorder prediction 255 295 - -
Aev05g0078 826 ProSiteProfiles U-box domain profile. 745 819 IPR003613 GO:0004842|GO:0016567
Aev05g0078 826 MobiDBLite consensus disorder prediction 259 274 - -
Aev05g0078 826 Gene3D Transferase(Phosphotransferase) domain 1 555 626 - -
Aev05g0078 826 Gene3D Transferase(Phosphotransferase) domain 1 627 725 - -
Aev05g0078 826 SMART Ubox_2 749 812 IPR003613 GO:0004842|GO:0016567
Aev05g0078 826 Pfam U-box domain 746 816 IPR003613 GO:0004842|GO:0016567
Aev05g0078 826 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 744 821 IPR013083 -
Aev05g0078 826 Coils Coil 344 385 - -
Aev05g0078 826 PANTHER OS02G0152300 PROTEIN 6 814 - -
Aev05g0078 826 SUPERFAMILY Protein kinase-like (PK-like) 470 704 IPR011009 -
Aev05g0078 826 Gene3D Phosphorylase Kinase; domain 1 454 554 - -
Aev05g0078 826 Coils Coil 414 448 - -
Aev05g0078 826 Pfam Protein tyrosine and serine/threonine kinase 489 626 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0078 Aev-Chr5 609426 613712 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0078 8 822 U-box Gene Family AT5G65500 48.251 0.0 755
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Aev05g0078 PK_Tyr_Ser-Thr 3.9e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0078 - - gmx:100786771 1161.75