Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0070 ATGGCTCTTCCCGGTTCTCTGCAGCTGTCCTATGGATTGGGACTTTGCAGGAACCTGGGCTACAATAAACATCCGCGGGTTGTGGGAAGAAGCAAGTTACATGTATTTGATGCAGGTCCTTCATATCCTCTTTCGTTCATGAAACAGGACTGTCGGGGTTTTCAGCACTTCCGTCACATAAATGGGCCAGTACATACATTATCTTACAAATCCCGCCCTTTCAAGTGCCATTCTCTTCTAGTACCAGGCCAGCCAAGTGAGCTACCAGTTATTAAGGTGGCTGCAACCTTGCTAGCAAGGTATTGTAATATGCTAAAAAGTAGTCCTGTCATATTAAAGGTGATTCCTACAGTTGGCATTATCATTTTTGCGGCATGGGGTCTTGGCCCATTAGCGTGTCAGACGAGGAAATTGCTTTTTCAGAGGAGTGATAATAATTGGAAGAAAAGTACTACACATTATATTGTAACTTCTTATCTTCGGCCTTTACTGTTATGGACTGGAGCAATACTTTTTTGCAGGGCACTGGAGCCAGTTGTTCTACATACAGAAACTGGCCAGGTTGTTAAGGAAAGGCTTTTGCATTTTGTAAGATCATTGTCGACTGTCCTGGCCTTCGCCTATTGTTTATCAAGTGTGATCCAACAAGCACAGAAATTCTTAACTGAGAGCACTGAAGCAAGTGAGACAAGAAATATGGGATTCCAATTTGCAGGCAAAGCTGTTTATTCGGCAGTATGGATTGCAGCTTTTTCACTGTTCATGGAATTGCTTGGCTTCTCTACCCAGAAATGGGTTACTGCAGGAGGTCTTGGGACAGTTTTGTTGACTCTTGCTGGTCGTGAGATATTTACAAACTTCCTTTCAAGTGCGATGATTCATGCAACACGTCCTTTTGTGGTTAATGAATGGATTCAAACAAAGATTGAAGGGTATGAGGTTTCTGGTACGGTTGAGCATGTTGGCTGGTGGTCACCTACGATCGTAAGAGGTGAAGATGGTGAAGCTGTACACATTCCAAACCACAAATTTACGGTGAATGTTGTGCGAAACCTCACTCAAAAAACACATTGGCGAATCAAAACCCACCTTGCCATTAGTCATTTGGATGTGAAAAAGATTAATAATATTGTTGCTGACATGCGGAAAGTGTTAGCAAAAAATCCTCAAGTTGAGCAGCAGAGGTTGCACAGGAGGGTGTTTTTGGAAAACATCAATCCTGAAAATCAGGCTCTTTTGATATTGATATCTTGTTTTGTCAAGACCTCACATTTTGAAGAATATTTATGTGTCAAGGAAGCTATTCTGTTGGATCTTCTTAGAGTTGTCGGCCATCATCGAGCCCGTCTTGCAACACCAGTTCGTACCCTGCAGAAAAGATACACTGATGCTGACCTGGAGAACATTCCATATGCAGAGTCCACAATTAGTGGTGCTGGAACAGTATCTAACCGTCCATTGTTAATGATTGAGTCGTCTTACAAGGTCAATGCAGATGATAAGTTGAAAAGCCGAGCAGTACGAGCAGCTGGAGATCAAGATAACAAGACAACTGCACAATCCAAACCTGACACCAAGACAGACACCAAGGTTGGACCGACCGGAGTACCAGATGCTAAGGCCACAGGAAGTCATGATGACTCTGAGGTGGACACCAAAGTGCTGACATCTAACACAAATGGAAACCCTAAGACTGCTGTGACACCTAGACCTGATCCTGAAGTGGGTGAAAACAAATCAACAAAATCAGATTCAACACAGAAGGAAACCAATGCCAAACAAACCAAGGGTCAGGCTGTCAAAAACGTCAAGCCAAACATCGACATGGATGATGCTGTTCCCTCCTCAGCGACGAGCAACGTTGACAAAGCTGGCGGACTTCCTGTGATTACGCCAGCAAAACAACAGCAAGGGGAAAGGAAACCTGCTGCACAGCCTCCTCATGCATCCAGACCTGTTCTTGAAGAAAATATAGTACTTGGCGTTGCATTAGAGGGATCGAAGAGGACCCTCCCTATTGAGGAAGGTATTGACACTGCCACGAATAGAGACACAAAGGAAATGGCTGCAAAGGGTGTTGATGGGAATGACAAGTAA 2097 0.4392 MALPGSLQLSYGLGLCRNLGYNKHPRVVGRSKLHVFDAGPSYPLSFMKQDCRGFQHFRHINGPVHTLSYKSRPFKCHSLLVPGQPSELPVIKVAATLLARYCNMLKSSPVILKVIPTVGIIIFAAWGLGPLACQTRKLLFQRSDNNWKKSTTHYIVTSYLRPLLLWTGAILFCRALEPVVLHTETGQVVKERLLHFVRSLSTVLAFAYCLSSVIQQAQKFLTESTEASETRNMGFQFAGKAVYSAVWIAAFSLFMELLGFSTQKWVTAGGLGTVLLTLAGREIFTNFLSSAMIHATRPFVVNEWIQTKIEGYEVSGTVEHVGWWSPTIVRGEDGEAVHIPNHKFTVNVVRNLTQKTHWRIKTHLAISHLDVKKINNIVADMRKVLAKNPQVEQQRLHRRVFLENINPENQALLILISCFVKTSHFEEYLCVKEAILLDLLRVVGHHRARLATPVRTLQKRYTDADLENIPYAESTISGAGTVSNRPLLMIESSYKVNADDKLKSRAVRAAGDQDNKTTAQSKPDTKTDTKVGPTGVPDAKATGSHDDSEVDTKVLTSNTNGNPKTAVTPRPDPEVGENKSTKSDSTQKETNAKQTKGQAVKNVKPNIDMDDAVPSSATSNVDKAGGLPVITPAKQQQGERKPAAQPPHASRPVLEENIVLGVALEGSKRTLPIEEGIDTATNRDTKEMAAKGVDGNDK* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0070 698 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 584 692 IPR045042 -
Aev05g0070 698 MobiDBLite consensus disorder prediction 507 654 - -
Aev05g0070 698 PANTHER MECHANOSENSITIVE ION CHANNEL-LIKE PROTEIN 584 692 - -
Aev05g0070 698 Gene3D - 298 351 IPR023408 -
Aev05g0070 698 MobiDBLite consensus disorder prediction 511 528 - -
Aev05g0070 698 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 589 IPR045042 -
Aev05g0070 698 MobiDBLite consensus disorder prediction 675 698 - -
Aev05g0070 698 PANTHER MECHANOSENSITIVE ION CHANNEL-LIKE PROTEIN 1 589 - -
Aev05g0070 698 Gene3D - 193 297 - -
Aev05g0070 698 Pfam Mechanosensitive ion channel 240 447 IPR006685 GO:0016020|GO:0055085
Aev05g0070 698 MobiDBLite consensus disorder prediction 679 698 - -
Aev05g0070 698 SUPERFAMILY Sm-like ribonucleoproteins 283 353 IPR010920 -
Aev05g0070 698 MobiDBLite consensus disorder prediction 587 601 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0070 Aev-Chr5 568368 572988 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0070 9 696 Mechanosensitive Ion Channel Family AT5G10490 54.978 0.0 716
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0070 K22047 - gmx:100789444 1052.35