Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0049 ATGGCTCCGCCGCCGGCACCCCAACCCGACCAGAAAAAGTGCATCACCACCGCCACAAAGCGTGCGCTCCGAGAAAACAACGCTTCCAGCGGCGGCGGCGGCGGAGCCATGCGGTACCGCGGCGTGAGGCGGAGGCCATGGGGCCGTTACGCCGCCGAGATAAGGGACCCTCAGTCCAAGGAGCGGCGGTGGCTGGGGACCTTCGACACGGCGGAGGAAGCCGCCTGTGCCTACGACTGCGCCGCTAGGGCCATGCGTGGCCTGAAAGCAAGAACCAACTTCGTGTACCCGCCTGATCCTCCTCCTTCCGGCCACCACCATAACCACCTCTTCAACCACTTTAACCTCCCAATAAAGCAGCAAACTCATAACCAATTCTTTAACGGTAACAGTAGCCGTCATCATCAGTTAGTTGGCGGCGCGGGTTGTTGGCAGCAGTTGTCGTCGCCAGACCCTCACGCCGTTAACTTTAACGTGGAGCAGCTCTTATCATCTCCGTTATACCACCGAAACAGCACTACTTGTTCTGCACTCAGCATCAACAACAACAACAACAACAATAATAATAATAATAATAATAATAATATGTATCTCCTTGGCGACTTATTCCCCTCAAATGACCACCATTCCTCCGCTAGTGGTGGTAGCCAGCTGTTTCTTCCCGATGACCCCTTTTCCACCAACAAGGGCAGTTTCGTGAGTTCACTAGGCGATGGCCGTAACAGTAACGGTTACGGTTACGGCGGGGTGAGTTCCCTCAACATGAACACAAATAATAACAATAATACAAAGCAGAGTGAAGAAGGAGGTGCAGGTGGCGGTTTGGAATTGGATGAGGAGTTACTTGAAGGAGGTTCGTCATCATCGGGGTCTGGTTTGTTGGAGGAGATTGTTAGCAGGTTCTTGAAGCCGCAGAAGAAGAAGAAGAAGAGCGATGACGAGTACTGTCCTACTAATCACGTGCAGCTGCCTCCTAATAATAATTTGGATCAACAATTACTACTACAGCAGCAACAAGGTGGTTTCACCACCACCGACTTTGGTGGTAGTGCTATGCCATCCCTACTGCTGGGAACTAATAATAGTAATGATCCGAGAATGGTGATGAACCATGGTGCAGGTGCAGCAGCAGCAGCAGCAGATCAATGCTCTTTCATGGAAGACATTCTTCAATACCCTGATGAGATTCTTAACAATGCCTGCTTTCCCTCTCAGAATGCAAAATGCTTAATTACCAGTTAG 1242 0.5097 MAPPPAPQPDQKKCITTATKRALRENNASSGGGGGAMRYRGVRRRPWGRYAAEIRDPQSKERRWLGTFDTAEEAACAYDCAARAMRGLKARTNFVYPPDPPPSGHHHNHLFNHFNLPIKQQTHNQFFNGNSSRHHQLVGGAGCWQQLSSPDPHAVNFNVEQLLSSPLYHRNSTTCSALSINNNNNNNNNNNNNNNMYLLGDLFPSNDHHSSASGGSQLFLPDDPFSTNKGSFVSSLGDGRNSNGYGYGGVSSLNMNTNNNNNTKQSEEGGAGGGLELDEELLEGGSSSSGSGLLEEIVSRFLKPQKKKKKSDDEYCPTNHVQLPPNNNLDQQLLLQQQQGGFTTTDFGGSAMPSLLLGTNNSNDPRMVMNHGAGAAAAAADQCSFMEDILQYPDEILNNACFPSQNAKCLITS* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0049 413 MobiDBLite consensus disorder prediction 18 40 - -
Aev05g0049 413 Pfam AP2 domain 38 87 IPR001471 GO:0003700|GO:0006355
Aev05g0049 413 MobiDBLite consensus disorder prediction 304 326 - -
Aev05g0049 413 SUPERFAMILY DNA-binding domain 38 95 IPR016177 GO:0003677
Aev05g0049 413 CDD AP2 38 94 IPR001471 GO:0003700|GO:0006355
Aev05g0049 413 PRINTS Ethylene responsive element binding protein signature 61 77 IPR001471 GO:0003700|GO:0006355
Aev05g0049 413 PRINTS Ethylene responsive element binding protein signature 39 50 IPR001471 GO:0003700|GO:0006355
Aev05g0049 413 ProSiteProfiles AP2/ERF domain profile. 38 95 IPR001471 GO:0003700|GO:0006355
Aev05g0049 413 MobiDBLite consensus disorder prediction 247 268 - -
Aev05g0049 413 SMART rav1_2 38 103 IPR001471 GO:0003700|GO:0006355
Aev05g0049 413 Gene3D AP2/ERF domain 37 96 IPR036955 GO:0003700|GO:0006355
Aev05g0049 413 MobiDBLite consensus disorder prediction 247 290 - -
Aev05g0049 413 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 14 398 - -
Aev05g0049 413 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ESR2-LIKE 14 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0049 Aev-Chr5 369748 370989 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0049 37 106 AP2-EREBP Transcription Factor Family AT1G24590 88.571 1.26e-37 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Aev05g0049 AP2 3.1e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0049 - - gmx:102669715 159.073