Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0048 ATGGAAGATGCACTGAGGCGTCTCAACGCCACGGCCCCGCTGCCGCCACCTCAGCAAGACCACAAGAAGTTTGCCACCGCCCCAAAGCCTACGCTCCCAGATAACGGCGCTTCCCGTGGCAGCGCCAGAGCCACCAGGTACCGCGGCGTTAGGCGGAGGCCGTGGGGCCGTTACGCCGCCGAGATAAGGGACCCTCAGTCCAAGGAGCGGCGGTGGCTGGGGACCTTCGACACGGCGGAGGAAGCCGCCTGTGCCTACGACAGCGCCGCCAGGGCCATGCGTGGTATGAAAGCAAGAACCAACTTCGTGTACCCGCCTGATCCTCCTCCTTCCGGCCACCACCATAACCACCTCTTCAACCACTTTAACCTCCCAATAAAGCAGCAAACTCATAACCAATTCTTTAACGGTAACAGTAGCCGTCATCATCAGTTAGTTGGCGGCGCGGGTTGTTGGCAGCAGTTGTCGTCGCCAGACCCTCACGCCGTTAACTTTAACGTGGAGCAGCTCTTATCATCTCCGTTATACCACCGAAACAGCACTACTTGTTCTGCACTCAGCATCAACAACAACAACAACAACAATAATAATAATAATAATAATAATAATATGTATCTCCTTGGCGACTTATTCCCCTCAAATGACCACCATTCCTCCGCTAGTGGTGGTAGCCAGCTGTTTCTTCCCGATGACCCCTTTTCCACCAACAAGGGCAGTTTCGTGAGTTCACTAGGCGATGGCCGTAACAGTAACGGTTACGGTTACGGTTACGGTTACGGCGGGGTGAGTTCCCTCAACATGAGCACAAATAATAATAATAATACAAAGCAGAGTGAAGAAGGAGGTGCAGGTGGCGGTTTGGAATTGGATGAGGAGTTACTTGAAGGAGGTTCTTCATCATCGGGGTCTGGTTTGTTGGAGGAGATTGTTAGCAGGTTCTTGAAGCCGCAGAAGAAGAAGAAGAAGAGCGATGACGAGTACTGTCCTACTAATCACGTGCAGCTGCCTCCTAATAATAATTTGGATCAACAATTACTACTACAGCAGCAACAAGGTGGTTTCACCACCACCGACTTTGGTGGAAGTGCTATGCCATCCCTACTTCTGGGAACTAACAATAATGATCCAATAATGGTGATGAACCATGGTGCAGGTGCAGCAGCAGCAGCAGCAGCAGATCAATGCTCTTTCATGGAAGACATTCTGCAGTACCTGGAGATTCCTAACGATGATGCATTCGCTGTCACAGTCCACACTGCTTAG 1263 0.5139 MEDALRRLNATAPLPPPQQDHKKFATAPKPTLPDNGASRGSARATRYRGVRRRPWGRYAAEIRDPQSKERRWLGTFDTAEEAACAYDSAARAMRGMKARTNFVYPPDPPPSGHHHNHLFNHFNLPIKQQTHNQFFNGNSSRHHQLVGGAGCWQQLSSPDPHAVNFNVEQLLSSPLYHRNSTTCSALSINNNNNNNNNNNNNNNMYLLGDLFPSNDHHSSASGGSQLFLPDDPFSTNKGSFVSSLGDGRNSNGYGYGYGYGGVSSLNMSTNNNNNTKQSEEGGAGGGLELDEELLEGGSSSSGSGLLEEIVSRFLKPQKKKKKSDDEYCPTNHVQLPPNNNLDQQLLLQQQQGGFTTTDFGGSAMPSLLLGTNNNDPIMVMNHGAGAAAAAAADQCSFMEDILQYLEIPNDDAFAVTVHTA* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0048 420 MobiDBLite consensus disorder prediction 268 302 - -
Aev05g0048 420 PRINTS Ethylene responsive element binding protein signature 47 58 IPR001471 GO:0003700|GO:0006355
Aev05g0048 420 PRINTS Ethylene responsive element binding protein signature 69 85 IPR001471 GO:0003700|GO:0006355
Aev05g0048 420 ProSiteProfiles AP2/ERF domain profile. 46 103 IPR001471 GO:0003700|GO:0006355
Aev05g0048 420 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ESR2-LIKE 24 407 - -
Aev05g0048 420 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 24 407 - -
Aev05g0048 420 MobiDBLite consensus disorder prediction 1 48 - -
Aev05g0048 420 CDD AP2 45 102 IPR001471 GO:0003700|GO:0006355
Aev05g0048 420 Gene3D AP2/ERF domain 45 104 IPR036955 GO:0003700|GO:0006355
Aev05g0048 420 SUPERFAMILY DNA-binding domain 46 103 IPR016177 GO:0003677
Aev05g0048 420 Pfam AP2 domain 45 96 IPR001471 GO:0003700|GO:0006355
Aev05g0048 420 SMART rav1_2 46 111 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0048 Aev-Chr5 361529 362791 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0048 45 114 AP2-EREBP Transcription Factor Family AT1G24590 85.714 1.93e-35 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev05g0048 AP2 1.3e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0048 - - gmx:100805376 160.229