Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0043 ATGCCTCTTCTACTCGCAGCTACACACCTTCCCTTATTCCCTTCGATCTCACACCACAACAACACCACCACCACCACACTCTCTCTAAAGCACTTCCCTTTCCCTCCTAACACCACCCCCACGACGCCACCCTTTCTCTCTCCTCCTCTTCTCCGCTCAAGGCGCATTCTCTCATTGTCCCCTCAGTCCGCCTCCTCCATCAACGGTGTCTACGTTCAGAACAATCTAGAACCTTCAAGAACAGAGGAAACTGCTGCTGCTCCTCCTCCTCCTCTGCCCGAGTTCTTCCTCAGATGGATCCGCTTACTCCCTTCGATTCTTCCCGGTGGAACCTGGTGGAACTTTGATGATGGCATCGAGGTCCAGGTATCGGCACAGCCGGTTACCGTGTGGCGCGCCCTCGCCAAAATGTGGGAACTCGTTGCACGTGACCGATGGGTCATCTACGCCGCTTTCTCCGCTCTCATTCTTGCAGCGGTTTCGGAGATTTCGATACCGCACTTCTTGACGGCGTCGATCTTCACGGCACAGGGTGCGGACATTGCGGTTTTTCATCGGAATGTGCGGCTTTTGGTTGTGTTGTGTGTAACTTCGGGAATATGCAGTGGGATACGAGGTTGCTGTTTTGGCATTGCGAACATGATTCTGGTTAAGAGAATGAGAGAAACATTATACTCGTCCCTTCTTGTTCAGGACATATCATTTTTTGACTCTGAAACAGTTGGTGATTTGACGAGTAGGCTTGGGGCTGATTGTCAACAAGTGTCACGGGTTATTGGAAATGATCTTAACTTGATATTGCGCAATGTTCTTCAGGGAACAGGTTCATTAATCTACTTGTTGATTTTGTCTTGGCCACTTGGTTTGTGTACACTGATAATATGCTCCATAGTAGCAGCGGTTATGATACGCTATGGAAGGTACCAGAAAAAGGCAGCAAGGTTGATTCAAGAAGTCACGGCTTCTGCAAATGATGTAGCTCAAGAGACGTTCTCTCTTATTCGAACTGTCCGTGTTTATGGAACGGAAGAAGAAGAACTCGGAAGGTACAAATGGTGGCTAGGGAAATTAGCTGACATAAGCTTGCGACAAAGTGCTGCATATGGATTTTGGAATTTTAGCTTCAATACTCTCTATCATTCTACTCAGGTTATCGCTGTGCTGTTTGGAGGAATGTCTATTCTTGCGGGTCATATTACTGCAGAGAAACTTACTAAGTTTATACTATACAGTGAATGGCTAATTTATTCAACCTGGTGGGTGGGAGACAATATTTCCAATTTGATGCAATCTGTTGGAGCTAGTGAAAAAGTATTCAATTTAATGGATCTCTCACCTAGCAGCCAATTTATATCAAGAGGAGTAAAGTTGCAGGGTTTAGTGGGGCATATTGAGTTCCTAAATGTATCTTTTCGCTATCCTTCAAGGCCAGAGGTATCTGTAGTGCAACTTGTAAACTTTGTGGTCCACCCCGGTGAGGTGGTTGCAATTGTTGGTCTTAGTGGTAGTGGAAAAAGCACACTGGTGAACCTTTTGCTCCGCCTTTATGAGCCAACAAATGGCCAGATTTTGATAGATGGAATACCTATTAAAGATTTGGACATCATGTGGTGGAGAGAAAGAATTGGATATGTGGGACAGGAACCTAAGCTTTTCCGGATGGATATTAGTTCAAACATCAGATATGGATGTACTCGAGATATAAAACAGGAGGATGTTGAATGGGCTGCAAAGCAGGCCTATGCCCATGACTTCATCTCAGCACTTCCCAATGGTTATGAAACAATTGTCGATGATGATCTGTTAAGTGGGGGACAAAAACAGCGGATTGCTATTGCTAGAGCCATCCTTAGGGATCCAAAAATATTGATCCTTGATGAAGCAACGAGTGCGCTGGATGCCGAGAGCGAACATAATGTCAAGGGTGTTCTTCGATCCGTCAAAAGTGACTCTGGGACAAGGAGAAGCGTCATAGTCATTGCACACAGGCTATCTACGATACAAGCAGCTGACAGGATCGTGGTAATGGATGGTGGTCATGTTGTGGAGATTGGAAGTCACAGGGAACTTCTCCTAAAAGATGGATTATATGCGCGGTTGACTAGAAAACAGGCTGATGCCATGGCATGA 2130 0.4577 MPLLLAATHLPLFPSISHHNNTTTTTLSLKHFPFPPNTTPTTPPFLSPPLLRSRRILSLSPQSASSINGVYVQNNLEPSRTEETAAAPPPPLPEFFLRWIRLLPSILPGGTWWNFDDGIEVQVSAQPVTVWRALAKMWELVARDRWVIYAAFSALILAAVSEISIPHFLTASIFTAQGADIAVFHRNVRLLVVLCVTSGICSGIRGCCFGIANMILVKRMRETLYSSLLVQDISFFDSETVGDLTSRLGADCQQVSRVIGNDLNLILRNVLQGTGSLIYLLILSWPLGLCTLIICSIVAAVMIRYGRYQKKAARLIQEVTASANDVAQETFSLIRTVRVYGTEEEELGRYKWWLGKLADISLRQSAAYGFWNFSFNTLYHSTQVIAVLFGGMSILAGHITAEKLTKFILYSEWLIYSTWWVGDNISNLMQSVGASEKVFNLMDLSPSSQFISRGVKLQGLVGHIEFLNVSFRYPSRPEVSVVQLVNFVVHPGEVVAIVGLSGSGKSTLVNLLLRLYEPTNGQILIDGIPIKDLDIMWWRERIGYVGQEPKLFRMDISSNIRYGCTRDIKQEDVEWAAKQAYAHDFISALPNGYETIVDDDLLSGGQKQRIAIARAILRDPKILILDEATSALDAESEHNVKGVLRSVKSDSGTRRSVIVIAHRLSTIQAADRIVVMDGGHVVEIGSHRELLLKDGLYARLTRKQADAMA* 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0043 709 Pfam ABC transporter 485 630 IPR003439 GO:0005524
Aev05g0043 709 ProSitePatterns ABC transporters family signature. 602 616 IPR017871 GO:0005524
Aev05g0043 709 SMART AAA_5 491 680 IPR003593 -
Aev05g0043 709 Gene3D ABC transporter type 1, transmembrane domain 120 294 IPR036640 GO:0005524|GO:0016021
Aev05g0043 709 PANTHER ABC TRANSPORTER B FAMILY MEMBER 26, CHLOROPLASTIC 88 708 - -
Aev05g0043 709 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 150 430 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aev05g0043 709 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 464 703 IPR003439 GO:0005524
Aev05g0043 709 CDD ABC_6TM_TAP 151 438 - -
Aev05g0043 709 Gene3D - 462 705 IPR027417 -
Aev05g0043 709 SUPERFAMILY ABC transporter transmembrane region 136 444 IPR036640 GO:0005524|GO:0016021
Aev05g0043 709 PANTHER ABC TRANSPORTER B FAMILY 88 708 - -
Aev05g0043 709 PIRSF ABC_prm/ATPase_B 77 709 - -
Aev05g0043 709 Gene3D ABC transporter type 1, transmembrane domain 295 461 IPR036640 GO:0005524|GO:0016021
Aev05g0043 709 Pfam ABC transporter transmembrane region 154 415 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aev05g0043 709 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 457 704 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0043 Aev-Chr5 326297 332444 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0043 219 707 Calmodulin-binding Proteins AT2G36910 34.538 1.70e-71 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0043 - - gmx:100775951 1108.59