Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0029 ATGGAGGAAACGTACGGAGTGGCGGAGTACGCCGACAAGGCCCTCATGACGCCGGAGAATCTGATCTTGCCGGTGGACTACCACAGCTTGTTGATGTCTTCCGCCGCAGCGCGGATTCCGTTGTTGGGATCGGAGGAGTTCCTCTCGGGCGCAGAACCCGAGGATGAGGCGGTTGCTTCCGCGGTGACGAAGGCCAAAATCGCATCCCACCCTCAGTACCCTCGCCTGCTCCAAGCCTACATCGATTGCCAGAAGGTCGGGGCGCCTCCGGAAATCGCGTGTTGGTTGGACGAAATCCGGCGAGAAAAGGACGTTTGCAAGAGCGACGTTGTTTCCAGCACGTGCTTTGGAGACGATCCCGAGCTCGACGAGTTCATGGAAAGGTACTGTGAGTTGCTGGTGAAGTATAAATCGGAGCTGGCTGGGCCGTTGGATGAAGCAACGAGGTTCCTTAACAAGATCGAAATGCAGCTCAGCCACCTCTGCTGCTCCCCTTCTGATGGTTCTGTTCCAACTCTTTCTGAGGAGGGGGGTGTGTCTTCATCGGAGGAGATTACGAGTGGTGGAGAGGATCGTGAGCTGAAGGACAGGCTTCTACGCAAGTTTGGGAGTCACATTGGGACTTTGAAATTGGAGTTCTCCAAGAAGAAAAAGAAGGGTAAGCTTCCCAAGGAGGCAAGACTAACACTTCTTCAGTGGTGGAATCTTCACTACAAATGGCCTTACCCTACGGAGGCAGATAAGATTGAACTGGCAAAGTCAACAGGGCTGGACCAGAAGCAAATAAACAATTGGTTCATTAACCAAAGAAAGCGTCACTGGAAACCGTCTGAGAATATGCACTTCTCTATGATGGAAAATCTCACCGGACGCTTCCTTGCTTCTTCTTCTGATGAATGA 900 0.5233 MEETYGVAEYADKALMTPENLILPVDYHSLLMSSAAARIPLLGSEEFLSGAEPEDEAVASAVTKAKIASHPQYPRLLQAYIDCQKVGAPPEIACWLDEIRREKDVCKSDVVSSTCFGDDPELDEFMERYCELLVKYKSELAGPLDEATRFLNKIEMQLSHLCCSPSDGSVPTLSEEGGVSSSEEITSGGEDRELKDRLLRKFGSHIGTLKLEFSKKKKKGKLPKEARLTLLQWWNLHYKWPYPTEADKIELAKSTGLDQKQINNWFINQRKRHWKPSENMHFSMMENLTGRFLASSSDE* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0029 299 ProSiteProfiles 'Homeobox' domain profile. 213 276 IPR001356 GO:0003677
Aev05g0029 299 SMART KNOX2_2 112 163 IPR005541 GO:0003677|GO:0005634
Aev05g0029 299 Pfam KNOX1 domain 64 103 IPR005540 GO:0003677|GO:0005634
Aev05g0029 299 SMART HOX_1 215 280 IPR001356 GO:0003677
Aev05g0029 299 MobiDBLite consensus disorder prediction 170 185 - -
Aev05g0029 299 MobiDBLite consensus disorder prediction 170 190 - -
Aev05g0029 299 CDD homeodomain 225 277 IPR001356 GO:0003677
Aev05g0029 299 SMART KNOX1_2 61 105 IPR005540 GO:0003677|GO:0005634
Aev05g0029 299 Pfam KNOX2 domain 116 162 IPR005541 GO:0003677|GO:0005634
Aev05g0029 299 ProSitePatterns 'Homeobox' domain signature. 251 274 IPR017970 GO:0000981|GO:0006355
Aev05g0029 299 Pfam Homeobox KN domain 233 272 IPR008422 GO:0003677|GO:0006355
Aev05g0029 299 ProSiteProfiles ELK domain profile. 193 213 IPR005539 GO:0003677
Aev05g0029 299 Gene3D - 212 285 - -
Aev05g0029 299 SMART ELK_2 193 214 IPR005539 GO:0003677
Aev05g0029 299 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 54 294 - -
Aev05g0029 299 Pfam ELK domain 193 214 IPR005539 GO:0003677
Aev05g0029 299 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 2 54 294 - -
Aev05g0029 299 SUPERFAMILY Homeodomain-like 214 285 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0029 Aev-Chr5 220536 227316 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0029 1 293 Homeobox Transcription Factor Family AT1G23380 61.538 6.11e-127 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-KNOX Aev05g0029 KNOX2 1.9e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0029 - - gmx:100794719 434.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0029 05 220536 227316 Aev05g0029 05 220536 227316 ECH