Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0019 ATGATGATGCAGGTAAGTGTCCCTTGCAGTAGTTTATCAATGGTGGTGACAGTAAGATGTGGGCACTGCACAAGCCTTCTATCAGTTAACATGATGAAAGCTTCTTTTGTTCCTTTACACCTTTTAGCTTCTCTTACTCATCTTGAGTCAAAAGAAAGTGGTAGTCCAGAGGAGGATGCAACCAACAACACTTTGAATAATAGCCACAGTGCATCTATGATGATGACATGCTATTCTGATTGTGATGAAGAGGATAATGTAACTGCAATGAACATTGTGGTCAATAAACCCCCAGAGAAGAGACAGAGAACTCCATCAGCTTATAACCGCTTCATCAAAGAAGAAATTAAGAGGCTAAAGGCTGAAAACCCTGACATGGCACACAAGGAAGCTTTCAGTACAGCAGCAAAGAATTGGGCCAATTTCCCCCAAACTAATCAGACTGAGCAACTTACGGATCTGGACTCCCAGGTGGACCCTCATGATGATGCTGAGGTCAAGGAAGAAGAAGATCAAGATTTCCGTGGAAGGAAGATTCAAAGGAATTCCATCATGGAGAGGACACAGCTTGAATGA 576 0.4253 MMMQVSVPCSSLSMVVTVRCGHCTSLLSVNMMKASFVPLHLLASLTHLESKESGSPEEDATNNTLNNSHSASMMMTCYSDCDEEDNVTAMNIVVNKPPEKRQRTPSAYNRFIKEEIKRLKAENPDMAHKEAFSTAAKNWANFPQTNQTEQLTDLDSQVDPHDDAEVKEEEDQDFRGRKIQRNSIMERTQLE* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0019 191 Gene3D High mobility group box domain 93 180 IPR036910 -
Aev05g0019 191 PANTHER AXIAL REGULATOR YABBY 4 3 156 - -
Aev05g0019 191 MobiDBLite consensus disorder prediction 155 184 - -
Aev05g0019 191 Pfam YABBY protein 2 145 IPR006780 GO:0007275
Aev05g0019 191 MobiDBLite consensus disorder prediction 147 191 - -
Aev05g0019 191 SUPERFAMILY HMG-box 93 144 IPR036910 -
Aev05g0019 191 PANTHER PROTEIN YABBY 6-RELATED 3 156 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0019 Aev-Chr5 147198 148842 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0019 2 191 C2C2-YABBY Transcription Factor Family AT1G23420 52.970 1.09e-53 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Aev05g0019 YABBY 2.7e-53 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0019 K25796 - gmx:100779415 265.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0019 05 147198 148842 Aev05g0019 05 147198 148842 ECH
Aev05g0019 05 147198 148842 Aev03g0580 03 4236700 4239603 PCT