Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3774 ATGATGGAAGGCATCCAATCCAATCCAAGGGTCCAAAACACAAGAAGAAATGCCAAAGGAACCGTCTGGTTTCTCCGGGACACCACCGAATACAATTCACCATTTCCATCCATCAGTCTCATAGAAGCAGAACAGAACAGAACAGAACAGAACAGGACCAACATAGCAACTCCTGAGCCCGAGGTTGAGACTGTGACGATGCAACCCACTCCTGCCAGCGAAAGCAATAGCGGTGGCGGTGGCGGTGGCGGTGGAGGACTTGCCCGGTTCCGTTCAACTCCAGCGACCTTGTTAGAAACACTTCTGCTTAAAGAAGAAGAGGAAGACGAAGGAGAAGACCTGTTGGGCTTGAATAACAGCACCAACCAGGGCTTCACGCACCTTCTCTCCGGTGACCCTGTTGGGTTTTTCCGTCAGAACAGTTCGCCGGCCGAGTTTCTCGGGAACTCGGTCTTCAACTCTCAACAGTACATATCCAAGTACGACTACGACTACGACTACGACTACGACTACGCCTCCGCCTCCCCAGATAACGCTAATGCCAATCCTATCCCACAGGAAGTAGAGGAGGATGGTGAAGTATCGGTGAAAGTGGAGAAGATATTAGAGGAGTCGGTACTGTGTAGAGTTCGGGCAAAGCGTGGGTGTGCTACCCATCCAAGGAGCATCGCTGAAAGGGTTCGGAGGACTCGTATCAGTGACCGCATCAGAAAGCTGCAAGAACTAGTGCCAAACATGGATAAGCAAACGAATACTGCAGACATGTTAGACGAGGCAGTAGCTTATGTCAAGTTTCTACAAAAGCAAATTGAGGTACTCACTCTTGTTTGTGCTATGCCTTGTGGCTGGGATTGA 855 0.5018 MMEGIQSNPRVQNTRRNAKGTVWFLRDTTEYNSPFPSISLIEAEQNRTEQNRTNIATPEPEVETVTMQPTPASESNSGGGGGGGGGLARFRSTPATLLETLLLKEEEEDEGEDLLGLNNSTNQGFTHLLSGDPVGFFRQNSSPAEFLGNSVFNSQQYISKYDYDYDYDYDYASASPDNANANPIPQEVEEDGEVSVKVEKILEESVLCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEAVAYVKFLQKQIEVLTLVCAMPCGWD* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3774 284 SMART finulus 222 272 IPR011598 GO:0046983
Aev04g3774 284 Gene3D - 217 276 IPR036638 GO:0046983
Aev04g3774 284 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 216 266 IPR011598 GO:0046983
Aev04g3774 284 PANTHER TRANSCRIPTION FACTOR BHLH117-RELATED 118 273 - -
Aev04g3774 284 Pfam Helix-loop-helix DNA-binding domain 221 267 IPR011598 GO:0046983
Aev04g3774 284 MobiDBLite consensus disorder prediction 47 77 - -
Aev04g3774 284 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 219 276 IPR036638 GO:0046983
Aev04g3774 284 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 118 273 - -
Aev04g3774 284 MobiDBLite consensus disorder prediction 47 90 - -
Aev04g3774 284 CDD bHLH_AtbHLH_like 221 273 IPR045239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3774 Aev-Chr4 34909951 34912095 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3774 135 274 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09180 50.000 1.86e-43 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev04g3774 HLH 2.3e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3774 - - adu:107477635 201.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3774 04 34909951 34912095 Aev04g3774 04 34909951 34912095 ECH