Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3765 ATGAGTTGTGCTTCTCCTTTAAAGGAAGGTGGTGGTGATGTAGGTAATAAGGGTGCGGTGGTGATGCAAGGCCTCTTTCTCGCCGCCGGCGCTTTCTCACCTCCGCGCCTCACCTTACCTGGCGATCAGCTCCGTCCGAAGCCGCAGGTTTCTCAATATCTACGTAGTAAAAATTGGGATACAAGAGTTGCAGCTGCTCGTGCAATTGGGTCTATTGCTGACAATGTTAAACACATAAATTTGGCTGAACTTATTGATTATGTTGTATCAAAAATGTCTGAGAATGGGATATCTTGTAGTGTGGAGGATCTGTGTGCATGGCCTTATTTGCAATCAAGAATCACAGGAAGCTCCTTCAGAAGTTTTGATATCAACAAGGTGCTTGAATTTGGAGCTTTATTGGCATCAGGAGGACAGGAATATGATATTGTAAGTGATAACATAAAGAACCCAAAGGAGCGATTGGTTCGCCAGAAGCAAAATCTTCGACGCCGTTTAGGTTTGGATGTATGTGAGCAATTTATGGATATTAGTGATGTAATAAGAGATGAAGATCTTATGGCACACAAGTCAGACTCACATCTCAATGGAATAGATCATAGAGTTTTTACATCTTGTTCTGTACATAACATCCAGAAAATGGTTGCAAACATGGTTCCTAGTGTCAAGTCAAAGTGGCCAAGTGCTAGAGAACTGAATCTTTTAAAGCGCAAAGCAAAAATAAACTCAAAGGACCAAACAAAAAGCTGGTGTGAAGATGGAGGTACGGAGCCATCAGGTGCTCAAAATTTGGCTTCTAAAGTCACACATCCTGATTCAGTAAATTACAATAAGGCATTTGTGGATGTTAATCATGATGAAGATGGCATTGACCATGATGGGGATGGACAATGGCCTTTCCTCACTTTTTTTGAGCAACTTATTATTGACATGTTCGATCCTGTTTGGGAGGTCCGCCATGGTAGTGTGATGGCACTGAGAGAGATTTTAACACATCAAGGTGCTTCTGCTGGGGTATTTAAACATGACTCACGCCTGGCTGGGGCCTTGTTTGTTGAGGTAGAAGACAAAAGTATGCCAAATATATTGAAGAGAGAGAGGGAGATTGATCTGAATATACAAGTTTCTGCAGATGAGCTTGAATCAAATTTGAAGAGGCCGAAGCTTGAAAATGTAGCATCATCAACCTCAATGGATAGTGTGATGACTTGCAATAATGAAGGTGATTTTGAAATCAGTGTTAGTTCTGAAATCCCTGGAAGCAATATACCTTTGGATTGTGGAAATGGGCAATTCAATTGTAATTCAGTTGGGATTGATCTGGAATCTTACTCCGATTGTTTGCAAGATGCATCCAAGGAACTTGCAAATATATCAGAGCAGAAAGCTTATTCTGTTGACAATAAGTTGCCCTCAGGAAATCTAAATGTTCTGAGAAATCTTCCTCAGAATTCTGAGCTGATGAATTTGGTTAAAGTGGCTAGAAGTTCCTGGCTTCGGAACTGTGGATTTCTTCAAGATTGTGTGATACGTTTTTTGTGCGTGTTATCACTGGACCGCTTTGGAGATTACGTATCTGATCAGGTTGTTGCTCCAGTGCGTGAAACCTGTGCACAGGCATTAGGTGCAGCGTTTAAGTACATGCACCCAGCACTAGTAAATGAAACATTATACATATTGTTGCAAATGCAGTGTAGACCAGAATGGGAGATTCGTCATGGTAGTCTTCTGGGTATCAAATATTTGGTTGCCGTGCGACAGGAGATGCTTCCTGATTTGCTTGGACGTGTTCTTCCTGCCTGTAAATCTGGGTTGGAGGACCCGGATGATGATGTTAGAGCAGTTGCTGCTGATGCTTTAATTCCAGCTGCAGCTGCGATTGTTGCTTTGCAGGGTCAAACTTTGCACACAATTGTGATGCTTTTGTGGGACATATTGCTTGATTTGGATGATTTAAGTCCATCCACTAGCAGTGTAATGAATCTGCTGGCAGAAATCTATTCTCAAGAAGATATGGTCCCAAATATGTACAAAGTTTTTAGATTGGGAGATGCAGAAATATCTATTCGGAATGGAATTGGTGGTGATGATCAAGAAGAAGAAAATCCTTATGTTCTTTCAACATTAGCACCACGTCTGTGGCCCTTTATGAGGCATAGTATCACTTCTGTCCGGTATTCAGCAATACGGACTCTGGAGAGGTTACTTGAAGCTGGATGCAAGAGAAGCATGTCTGAGCTGTCTGATGCTTCATTTTGGCCCTCTGCTATATTTGGGGATACACTTAGAATCGTATTTCAGAATTTGCTATTGGAAACAAATGAGGATATTTTGCAATGTTCTGAGAGAGTTTGGAGTCTCCTTGTTCAGTGTTCTGTGGAGGACTTGGATACTGCTGCGAGATCTTACATGACTTCTTGGATAGAACTTGCATCTACACCGTTTGGTTCAGCATTAGATGCCTCAAAGATGTTTTGGCCTGCTGCATTTCCAAGAAAAAGTCAATTTAAAGCTGCTGCTAAAATGAGAGCTGTGAGGATTGAAAATGATTGGAGTGGGGATCTTGGTTTTGATTCTATAAAAGGAACTATTCCGCAGGATAGAAACGGAGATGCTGTTATGAATTCAATGAAGATTGTTGTTGGTGCTGATGTAGACACCTCTGTGACTCATACTCGAGTGGTTACGGCAACTGCTTTGGGAATTTTTGCTTCTAAGCTGCCCGAGGGTTCTTTAAACTATATAATTGATCCACTGTGGAGGTCTCTAACCTCTTTGTCTGGTGTCCAACGCCAGGTTGCATCTATGGTACTAATTTCTTGGTTCAAGGAGATTGAGACAACAAGTTCATCCAAAAACCTTAATGGTATTCCTGGAGCCCTCAAAGATTGGTTGCTGGATTTATTAGCATGCTCTGACCCTGCATTGCCAACAAAAGATTCTCTTCTTCCTTACGCTGAGCTCTCAAGAACTTATTCAAAGATGCGTAATGAGGCTGGTCAATTGCTAAATGCTATCAAATCTTCTGGTATTTTTAATGAGTTACTGTCAACTACCAAAATTGAGTTGGATAGCTTGAGTGTGGATGATGCCATTAGTTTTGCATCAAAAGTTCCAGCAGTGTGTAGTGATAGTTCTGCGAATGATTCCAAGGTAAAGAATATTATAGATGATGTTGAATCCACAAAACAGAGGCTCTTGACAACTTCTGGCTATTTGAAATGTGTTCAGAGTAATTTGCATGTTACAGTCTCATCTGCAGTTGCAGCTGCAGTTGTTTGGATGTCTGAATTTCCTACACGACTTACCCCAATCATTTTGCCTTTGATGGCTTCAATCAGACGAGAACAGGAGGAAATACTGCAAATGAAGTCAGCTGAGGCACTGGCTGAGCTAATGTATCATTGTGTTGCTCGTAGGCCATGCCCCAATGATAAATTAATAAAGAATATATGCAGTTTGACATGCATGGATCCTTCTGAAACCCCACAAGCTAAATTCATTTCCTCCATGGAGAATATTGATGACCAAGGTTTTTTGTCTTTTGGAACTCCTGTGAACAGACATAAGTCAAAGGTCCATGTTTTGGCTGGCGAAGATCGATCGAAGGCGGAGGGGTTTATAAGTAGACGTGGGTCTGAGCTAGCATTGAGGCTTTTATGTGAGAAGTTTGGTGCTTTGTTATTTGACAGGCTTCCTAAGCTATGGGATTGCCTCACTGAAGTGCTTAAGCCTAGCTCCTCTGAAACTTCAACTGTCACTAATGAAAAACAAATCACTATGGCTATTGAGTCTGTTAGTGATCCCCAGACATTGATTAACAATATTCAGGTGGTAAGATCTATTGCTCCATTGTTAAATGAGGAGTTAAAGTCAAAACTGTTGACACTTCTCCCATGCATTTTTAAATGCGTTCAGCATCCTCATGTTGCAGTTAGATTAGCTGCTTCACGCTGCATCACTTCCATGGCCCGGTCAATGACTGTGAAAGTTATGGGAGCTGTGATTGAGAATGCTATCCCTATGTTGGAAGATGCATCTTTAGTTCATGCTCGGCAAGGAGCAGGCATGTTGATTAGTTTTCTTGTTCAGGGCCTTGGTGTAGAGTTGGTCCCTTATGCTCCTCTGTTGGTTGTTCCACTTCTAAGGTGTATGAGTGACTGTGATCAGTCTGTCAGACAGAGTGTGACCCATAGTTTTGCTGCTCTTGTTCCTTTACTACCTTTAGCGCGAGGCCTTCCTCAACCAATTGGATTAGGAGAAGGTATATCTAGAAATGCAGAGGATTTGCAATTTTTGGAGCAACTACTTGACAACTCTCATATTGAAGATTACAAGTTGTGCACTGAATTGAAAGTTACACTTAGAAGGTACCAACAGGAGGGCATAAATTGGTTAGCATTTTTGAAACGTTTCAAGCTTCATGGAATTTTATGTGATGACATGGGGCTTGGTAAGACACTTCAAGCATCAGCAATTGTTGCCTCTGATATTGCTGAGCATCAAACTCCAATTGGGAATGAGGACCTTCTACCATCCTTAATTATTTGCCCATCAACACTTGTAGGACACTGGGCCTTTGAGATCGAGAAGTATATTGATGTTTCAGTTATATCTAGTCTTCAATATGTTGGTTCAGCTCAGGATCGGATGCTTCTTCGAGATCATTTTTGCAAGCATAACGTGATTATAACATCATATGATGTTGTCCGTAAAGATATTGATTATTTAGGACAGCTTTTGTGGAATTACTGCATTTTAGATGAAGGGCATATAATCAAGAATGCTAAGTCTAAAGTTACGCTTGCTGTAAAGCAGCTGAAAGCCCAACACCGACTGATATTGAGTGGCACCCCAATACAGAATAACATCATGGACTTGTGGTCCCTTTTTGATTTTCTTATGCCTGGATTTCTTGGAACAGAGAGACAGTTCCAAGCGACATATGGAAAACCACTTTTAGCTGCAAGAGACCCGAAGTGCTCTGCTAAAGATGCTGAAGCAGGAGCACTTGCTATGGAGGCATTGCATAAGCAGGTCATGCCCTTCCTTCTTCGTCGAACAAAGGATGAAGTCCTGTCTGATTTGCCGGAGAAAATAATTCAAGACAGATACTGTGATTTGAGCCCTGTACAATTTAAGCTTTATGAACAGTTTTCTGGTTCTCGTGTAAAACAAGAAATGTCGTCTCTTGTGACAACGAATGAGTCAGCTCCAGCAGAAGGAAGTAGCAGTTCAACTAAAGCATCTTCACATGTTTTCCAGGCACTTCAATACTTGCTGAAGCTGTGTAGTCATCCATTGCTTGTTGTTGGTCAGAAGATTCCAGATTCACTGTCGACCATCCTCTCAGAACTGTTGCCAGCTGGTTCTGACGTCATTTCAGAGCTTCACAAACTCCATCACTCCCCAAAACTAGTTGCCCTTCAGGAGATTCTTGAAGAGTGTGGAATTGGAGTTGATGCTTCTGGCTCTGACGGTGCTGTTACCATTGGGCAGCACAGAGTCTTGATATTTGCTCAACACAAGGCTTTTCTGGATATAATTGAAAGAGATTTGTTTCAGACACACATGAAAAGTGTTACATATTTGCGGCTGGACGGATCAGTGGAACCAGAAAAGCGTTTTGACATCGTCAAAGCTTTCAATTCAGACCCTACCATTGATGTCCTACTGCTTACAACGCATGTGGGTGGGCTTGGTTTGAACTTGACATCTGCAAATACTCTTGTTTTTGTGGAGCATGACTGGAATCCAATGCGAGATCATCAGGCTATGGATAGAGCACACAGGTTAGGTCAGAAAAAGGTTGTTAATGTCCACCGCTTAATAATGCGTGGCACTTTGGAAGAGAAGGTTATGAGCCTACAGAGGTTCAAAGTGTCTGTGGCAAATGCTGTGATTAATTCGGAAAATGCTAGTATGAAAACGATGAATACAGATCAGTTGCTTGATTTGTTTGCTTCGGCAGATACCTCCAAGAAGGGAGCTTCCGCCGCCACAAAGAGTTCGGAGAAGAACCCGGAGGGAGACCCGAAACTGGTAGGCAGTGGGAAGGGGTTGAAATCGATACTTGGGGGATTGGAGGAACTATGGGACCAATCACAATACACGGAGGAGTACAATCTGAGTCAATTCTTGGCAAAGCTGAATGGTTGA 6159 0.4191 MSCASPLKEGGGDVGNKGAVVMQGLFLAAGAFSPPRLTLPGDQLRPKPQVSQYLRSKNWDTRVAAARAIGSIADNVKHINLAELIDYVVSKMSENGISCSVEDLCAWPYLQSRITGSSFRSFDINKVLEFGALLASGGQEYDIVSDNIKNPKERLVRQKQNLRRRLGLDVCEQFMDISDVIRDEDLMAHKSDSHLNGIDHRVFTSCSVHNIQKMVANMVPSVKSKWPSARELNLLKRKAKINSKDQTKSWCEDGGTEPSGAQNLASKVTHPDSVNYNKAFVDVNHDEDGIDHDGDGQWPFLTFFEQLIIDMFDPVWEVRHGSVMALREILTHQGASAGVFKHDSRLAGALFVEVEDKSMPNILKREREIDLNIQVSADELESNLKRPKLENVASSTSMDSVMTCNNEGDFEISVSSEIPGSNIPLDCGNGQFNCNSVGIDLESYSDCLQDASKELANISEQKAYSVDNKLPSGNLNVLRNLPQNSELMNLVKVARSSWLRNCGFLQDCVIRFLCVLSLDRFGDYVSDQVVAPVRETCAQALGAAFKYMHPALVNETLYILLQMQCRPEWEIRHGSLLGIKYLVAVRQEMLPDLLGRVLPACKSGLEDPDDDVRAVAADALIPAAAAIVALQGQTLHTIVMLLWDILLDLDDLSPSTSSVMNLLAEIYSQEDMVPNMYKVFRLGDAEISIRNGIGGDDQEEENPYVLSTLAPRLWPFMRHSITSVRYSAIRTLERLLEAGCKRSMSELSDASFWPSAIFGDTLRIVFQNLLLETNEDILQCSERVWSLLVQCSVEDLDTAARSYMTSWIELASTPFGSALDASKMFWPAAFPRKSQFKAAAKMRAVRIENDWSGDLGFDSIKGTIPQDRNGDAVMNSMKIVVGADVDTSVTHTRVVTATALGIFASKLPEGSLNYIIDPLWRSLTSLSGVQRQVASMVLISWFKEIETTSSSKNLNGIPGALKDWLLDLLACSDPALPTKDSLLPYAELSRTYSKMRNEAGQLLNAIKSSGIFNELLSTTKIELDSLSVDDAISFASKVPAVCSDSSANDSKVKNIIDDVESTKQRLLTTSGYLKCVQSNLHVTVSSAVAAAVVWMSEFPTRLTPIILPLMASIRREQEEILQMKSAEALAELMYHCVARRPCPNDKLIKNICSLTCMDPSETPQAKFISSMENIDDQGFLSFGTPVNRHKSKVHVLAGEDRSKAEGFISRRGSELALRLLCEKFGALLFDRLPKLWDCLTEVLKPSSSETSTVTNEKQITMAIESVSDPQTLINNIQVVRSIAPLLNEELKSKLLTLLPCIFKCVQHPHVAVRLAASRCITSMARSMTVKVMGAVIENAIPMLEDASLVHARQGAGMLISFLVQGLGVELVPYAPLLVVPLLRCMSDCDQSVRQSVTHSFAALVPLLPLARGLPQPIGLGEGISRNAEDLQFLEQLLDNSHIEDYKLCTELKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAEHQTPIGNEDLLPSLIICPSTLVGHWAFEIEKYIDVSVISSLQYVGSAQDRMLLRDHFCKHNVIITSYDVVRKDIDYLGQLLWNYCILDEGHIIKNAKSKVTLAVKQLKAQHRLILSGTPIQNNIMDLWSLFDFLMPGFLGTERQFQATYGKPLLAARDPKCSAKDAEAGALAMEALHKQVMPFLLRRTKDEVLSDLPEKIIQDRYCDLSPVQFKLYEQFSGSRVKQEMSSLVTTNESAPAEGSSSSTKASSHVFQALQYLLKLCSHPLLVVGQKIPDSLSTILSELLPAGSDVISELHKLHHSPKLVALQEILEECGIGVDASGSDGAVTIGQHRVLIFAQHKAFLDIIERDLFQTHMKSVTYLRLDGSVEPEKRFDIVKAFNSDPTIDVLLLTTHVGGLGLNLTSANTLVFVEHDWNPMRDHQAMDRAHRLGQKKVVNVHRLIMRGTLEEKVMSLQRFKVSVANAVINSENASMKTMNTDQLLDLFASADTSKKGASAATKSSEKNPEGDPKLVGSGKGLKSILGGLEELWDQSQYTEEYNLSQFLAKLNG* 2053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3765 2052 Gene3D - 1427 1686 IPR038718 -
Aev04g3765 2052 Pfam Helicase conserved C-terminal domain 1833 1933 IPR001650 -
Aev04g3765 2052 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1437 1687 IPR027417 -
Aev04g3765 2052 CDD SF2_C_SNF 1802 1944 - -
Aev04g3765 2052 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1823 1979 IPR001650 -
Aev04g3765 2052 MobiDBLite consensus disorder prediction 1997 2018 - -
Aev04g3765 2052 CDD DEXHc_Mot1 1455 1687 IPR044078 GO:0005524
Aev04g3765 2052 Pfam SNF2-related domain 1473 1769 IPR000330 GO:0005524|GO:0140658
Aev04g3765 2052 Coils Coil 441 461 - -
Aev04g3765 2052 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1688 1989 IPR027417 -
Aev04g3765 2052 Gene3D - 1200 1412 IPR011989 -
Aev04g3765 2052 MobiDBLite consensus disorder prediction 246 266 - -
Aev04g3765 2052 PANTHER TATA-BINDING PROTEIN-ASSOCIATED FACTOR 172 49 1983 IPR044972 GO:0003677|GO:0016887|GO:0017025
Aev04g3765 2052 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1467 1637 IPR014001 -
Aev04g3765 2052 Gene3D - 495 685 IPR011989 -
Aev04g3765 2052 SUPERFAMILY ARM repeat 48 1494 IPR016024 -
Aev04g3765 2052 SMART helicmild6 1847 1933 IPR001650 -
Aev04g3765 2052 Pfam Domain of unknown function (DUF3535) 784 1238 IPR022707 -
Aev04g3765 2052 SMART ultradead3 1451 1648 IPR014001 -
Aev04g3765 2052 Gene3D - 1697 2011 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3765 Aev-Chr4 34848824 34866921 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3765 1450 1988 RAD5 or RAD16-like Gene Family AT1G02670 26.700 4.17e-43 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Aev04g3765 DUF3535 1.3e-103 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3765 K15192 - gmx:100777977 3416.71