Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3764 ATGGTTGTCAACGAGAGGCCCTCTAAGAGGATGAAGAGAAGAGTAACCGCCGATCTCTACGACTTTCTCACCTTTCCCTCCACCGCCGCCGACTCCGCCCCCTCTGACGGTGCCTTCCGCCACTCCGTGCAGCAGTTTCTCACCGACCATGCTCGCATAGCCTTCCCGCCTTCACTCTTTCCGTCGCTCATGACGTGGCAGATCCTGTTCCGTGTGGGCGAACTCGTTGACGGCTCCGATCTCTCGCCCGCGTTGGTCACGCTCGACATTGTCGAGGAAGACGTCACTCGTTCTCGCAGTTCTGTGTACTGTGACCAGTGCCGAGTCGTTGGGTGGAGTGGGCATCCGGTGTGTCGAAAGCGATATCATTTCATTATAAGAGCTGCAAGCAACGCCATTGAAGGCTATCAAAGGCCTTGTTCTAGATGTGCCACTCTTGTCCAACTCTCTGAACCAAGGTGTAAATCGTGTAACTTTGCCATCAGCGTTGATGATCTTGAGGATTGGGTGTATCTTCAAATCGAAGATAGCACTCATCTTCTGCATGGTGTTGTCCACTCCAACGGCTATGGTCACCTGCTCACTCTTAATGGAAGAGAAGGTGGCTCAAAGCTTCTTTCTGGATCTGATATTATGGGTTTCTGGGATAGGCTTTGTGCTGCTATCTCTGTTAGGAAGGTCAGTGTGATGGATTTGTCCAAGAAGTTTGGGCTGGAATATCGAGTGCTGCACGCCATCACCAATGGACATTCCTGGTATGGCAATTGGGGTTATCAATTTGGGACTGGCAGCTATGCTCTTACTCAAGATGCCTACCAGAAAGCAGTGAATACCCTGTCAACCACGCCCTTGTCCTCGTTCTCATTCCAGGGCCGAGGACCACGAAGCCGCCTCCAGTGTGTTATTTCTCTCTACCAATCTTTGTCAGAGACTGAACTTCTAACAATTAAAGACCTCTTCTCTTTTTTGTTGGGACTGATTCATGAATTTCGCAAGCCCATGACCAAGAAAACATCTAAACAGGATGAATGCACTAGCAGTTGTAATTTGTTGTGTTTTTGGACGATAAGTGATGTTGAAGATGTCCAGCAGGCTTTGATCAAGGTGTTGCTTGCATCAGCTGCCTGTAGGGAGGTCAAATGGGTGTCAAGGCGTGCTCTCAAGGGTGCAGTTTGCAAGGGTGTTTCATCTCCAGAGCTTCTAGACTATAGTCTTAAGCACTTGGAAGGAAAATTAGCTGCCAACGGAATGGTAGTTCGCACACGATGCAATCCCACTACCAGTGCTGTTGAGTTCAGGCTGGAACCAGGGCCCCATATGCTTTGTGCAAATTCAAGCTATCCATCAGAAGAGCAAGTGATCTCTGATCTGACATTCTTATTTGATTCGGTAATTCACCCTGACAAAATGGTGAACTACAGACCTAAGATTATGAGGAAAAGGGTGGCTGATTCAGCAAGGAAGCTCCTTGACTGTAAGCAATTTATGAAGGACTACAAGTCAGATGCAATGGCTGTAGAACTGCCATCGGTCATTAGGCTGTGGTGTCAAGTGGAGCTTTCTGATCAGCCTAAAGATGATCCATCCCCACCGCCAGAGCTAATTGTGCTGCCTTTGAATGCTACTGTTGCTGACCTCAAGAGCGAAGCCACTAGTGCTTTTCAAGAGGTATACGCGATGTACAAGAGGTTTCAAGCTGAGGAACTAATAGGGTATGGGTCAATTAGTGATTCGCTCACAGTAAAATTCCTGCTTGGAACAAGCGGATCAGTCCGAATTGTAGGTAAATGCCCAGCGAAATATGGTCTCAGCCGATTCCGGATGGAACGAGGAACAGAGGTGTGGAAAGTTGATTGCCCTTGTGGGGCGCAGGATGATGATGGAGAAAGAATGTTAGCATGTGATACTTGTGGTGTTTGGCAGCATACCAGGTGCTCTGGAATAGATAATTCTGATGCAATGCCTTCAAAGTTTCTGTGTATGAGGTGTGTTAGCTCGTACAGACAGGAACAGGAAGCGAAGAACATGCCAGAGTGTGGCGGGGAATCTAACAAGTCTTGTAAAATATTGAACACTTGTTGCAGAGATGAAGCGGTGGCAGCGGATTGTGCAGCAGTTGCTTGTAACATAACAGTGGATTTTGGTGTACGTTGA 2154 0.4796 MVVNERPSKRMKRRVTADLYDFLTFPSTAADSAPSDGAFRHSVQQFLTDHARIAFPPSLFPSLMTWQILFRVGELVDGSDLSPALVTLDIVEEDVTRSRSSVYCDQCRVVGWSGHPVCRKRYHFIIRAASNAIEGYQRPCSRCATLVQLSEPRCKSCNFAISVDDLEDWVYLQIEDSTHLLHGVVHSNGYGHLLTLNGREGGSKLLSGSDIMGFWDRLCAAISVRKVSVMDLSKKFGLEYRVLHAITNGHSWYGNWGYQFGTGSYALTQDAYQKAVNTLSTTPLSSFSFQGRGPRSRLQCVISLYQSLSETELLTIKDLFSFLLGLIHEFRKPMTKKTSKQDECTSSCNLLCFWTISDVEDVQQALIKVLLASAACREVKWVSRRALKGAVCKGVSSPELLDYSLKHLEGKLAANGMVVRTRCNPTTSAVEFRLEPGPHMLCANSSYPSEEQVISDLTFLFDSVIHPDKMVNYRPKIMRKRVADSARKLLDCKQFMKDYKSDAMAVELPSVIRLWCQVELSDQPKDDPSPPPELIVLPLNATVADLKSEATSAFQEVYAMYKRFQAEELIGYGSISDSLTVKFLLGTSGSVRIVGKCPAKYGLSRFRMERGTEVWKVDCPCGAQDDDGERMLACDTCGVWQHTRCSGIDNSDAMPSKFLCMRCVSSYRQEQEAKNMPECGGESNKSCKILNTCCRDEAVAADCAAVACNITVDFGVR* 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3764 717 Pfam PHD-finger 619 665 IPR019787 -
Aev04g3764 717 ProSitePatterns Zinc finger PHD-type signature. 619 663 IPR019786 -
Aev04g3764 717 PANTHER PHD FINGER PLANT-LIKE PROTEIN 1 679 - -
Aev04g3764 717 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 604 670 IPR013083 -
Aev04g3764 717 CDD PHD_MMD1_like 618 663 - -
Aev04g3764 717 SUPERFAMILY FYVE/PHD zinc finger 608 666 IPR011011 -
Aev04g3764 717 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 1 679 - -
Aev04g3764 717 SMART PHD_3 618 664 IPR001965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3764 Aev-Chr4 34843699 34846547 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3764 7 663 PHD Transcription Factor Family AT5G22260 27.391 1.56e-87 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Aev04g3764 PHD 5.5e-09 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3764 - - gmx:100780558 1144.8