Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3758 ATGAGTCCAGTAAATATGGGGGGAGCAGGGCAGTTTGGTGACACGACATACACGAAAGTGTTCGTAGGAGGGTTGGCTTGGGAGACTCAGAAGGAGACCATGAAGAAGTACTTTGAGCAGTTCGGTGACATCCTCGAGGCTGTTGTCATCACTGACAAAGCCACTGGAAGATCTAAAGGCTACGGCTTTGTGACTTTCCGGGAGCCAGAAGCAGCGATGAGAGCCTGTGTTGACGCTGCTCCTGTAATCGACGGCAGAAGAGCCAACTGCAACCTTGCTTCTTTGGGTGTCCAGAGATCCAAGCCTTCTACCCCTAAGCATGCTGCTCCACCTGCAGGAGGAGGAGGAGGAAGGAACTTTAGGGTAATGGGTTCTTTCCAGACAGGATTTGGAGGAGTGGGATCAGCTTATCCTTCGGCAGCAACCTTTCCCCATTATGCCATCCAGCAAGGGATACCATACAATCTTTATGGGTACTCTCCATACTCCCCCGATTACACTTACCCCACGAGCTACTACAGTGTGTATGGAGGAGCAACAGCAGCACAGTACCCAGTGTACGGAACGGGAGGGATGATGACGGGTGCGGCGGCAGCGACAGCATTTTACCCGTACGTGCAGTACGGCGGAGGAGAAGGGAGTGGCGGGGGCTCAAGCGGGCAGGGTTACGGAGTGAACTACCCTCCTCCGCCTCATCATCACCACCAGCTGTTTCAGTATTCTGCCATTGCTGCTGCTGCTGCTGCAGCTTCAACTGGTGGATACGCCCAGCACTATGCTACTCCCATCTCTCTTGCTCCTTCCCCTGCCTTGCAATCAGGCGTGACCATGGCTCTTCAAGCTCCAATTCCTCATCGCTAG 861 0.5401 MSPVNMGGAGQFGDTTYTKVFVGGLAWETQKETMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHAAPPAGGGGGRNFRVMGSFQTGFGGVGSAYPSAATFPHYAIQQGIPYNLYGYSPYSPDYTYPTSYYSVYGGATAAQYPVYGTGGMMTGAAAATAFYPYVQYGGGEGSGGGSSGQGYGVNYPPPPHHHHQLFQYSAIAAAAAAASTGGYAQHYATPISLAPSPALQSGVTMALQAPIPHR* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3758 286 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 18 102 IPR000504 GO:0003723
Aev04g3758 286 PANTHER OS01G0876800 PROTEIN 1 281 - -
Aev04g3758 286 PANTHER BOULE-RELATED 1 281 IPR037366 GO:0003729
Aev04g3758 286 Gene3D - 7 116 IPR012677 -
Aev04g3758 286 SMART rrm1_1 19 91 IPR000504 GO:0003723
Aev04g3758 286 CDD RRM_RBM24_RBM38_like 18 93 - -
Aev04g3758 286 SUPERFAMILY RNA-binding domain, RBD 17 105 IPR035979 GO:0003676
Aev04g3758 286 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 20 75 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3758 Aev-Chr4 34805672 34811087 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3758 14 195 C2H2 Transcription Factor Family AT2G19380 30.851 1.32e-13 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3758 - - adu:107477578 421.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3758 04 34805672 34811087 Aev04g3758 04 34805672 34811087 ECH