Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3752 ATGGGTTCTTCTTCTTCAAATGGCGGTGTGCCTCCGGGATTCAGATTTCACCCGACGGATGAAGAGTTGTTGCATTACTACTTGAAGAAGAAGGTCTCCTTTCAGAAGTTTGATATGGATGTTATTAGAGAGGTCGACTTGAACAAGATGGAGCCTTGGGACTTGCAAGAGAGATGCAGAATTGGGTCAACGCCACAGAATGAGTGGTACTTCTTCAGCCACAAGGACCGAAAGTATCCAACAGGGTCAAGGACTAACAGGGCAACGAATGCAGGGTTCTGGAAAGCTACAGGGAGAGACAAGTGCATCCGCAACAGCTACAAGAAGATCGGCATGCGAAAGACCCTTGTCTTCTACAAAGGCAGAGCCCCTCACGGCCTCAAAACCGATTGGATCATGCACGAGTACCGCCTCGAAGATAATACTACTAATAATGATGCCAACAACTCCAATGAAGATGGGTGGGTGGTGTGCAGGGTGTTTAAGAAGAAGAACCTGTTCAAGATTGGGAATGAAGCAGCAGCCAATCACGAGCTCAACAACAACAACAACAACCACAGTAACAATAACAATAGTAGTAGCAGGGAAAACCACCATCATCACTACCTACTACAGCAACAACAGAACAACCCATCATCATCATCCACAGTGGGGTTTGAGCTCGACAAACCCGAGCTTGGCCTCCAGCACTACCCTCACTACTCACTCTTCCATGCACACGCACAGCCCCTTCTTCAAGCCCACAAGCCAATGGTGTACGACTACTCATCCTATGCATCCTCAGATCCCCCGGTGATAGCCAAGCAGCTCATGGCAACAAACCCTAGAGACTGCGAGAGCGCTAGCGAGGGCTTGAGGTATCAGCAGGTTCCGGAGCCAGGCATGGAAGTCGGCTCCTGTGACCAAGAGCAGATGGGTGCAGCAGCAAGAGAAGGTGGTGCTGGAGGAATGCATGAATGGGGTGTGCTTGATAGGCTTGTCAATGACGACTCAGCCAACAAAGCAGCGGGGCTCAGGTTCGAGGATGCAACTCCACCATCAGTTCACCAGATCAACCACCTTTCCTTGAGGGGAGAGATGGACTTTTGGGGCTATGCTAAACAATAA 1107 0.4986 MGSSSSNGGVPPGFRFHPTDEELLHYYLKKKVSFQKFDMDVIREVDLNKMEPWDLQERCRIGSTPQNEWYFFSHKDRKYPTGSRTNRATNAGFWKATGRDKCIRNSYKKIGMRKTLVFYKGRAPHGLKTDWIMHEYRLEDNTTNNDANNSNEDGWVVCRVFKKKNLFKIGNEAAANHELNNNNNNHSNNNNSSSRENHHHHYLLQQQQNNPSSSSTVGFELDKPELGLQHYPHYSLFHAHAQPLLQAHKPMVYDYSSYASSDPPVIAKQLMATNPRDCESASEGLRYQQVPEPGMEVGSCDQEQMGAAAREGGAGGMHEWGVLDRLVNDDSANKAAGLRFEDATPPSVHQINHLSLRGEMDFWGYAKQ* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3752 368 Gene3D NAC domain 19 168 IPR036093 GO:0003677|GO:0006355
Aev04g3752 368 Coils Coil 176 196 - -
Aev04g3752 368 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 307 - -
Aev04g3752 368 SUPERFAMILY NAC domain 9 163 IPR036093 GO:0003677|GO:0006355
Aev04g3752 368 ProSiteProfiles NAC domain profile. 10 163 IPR003441 GO:0003677|GO:0006355
Aev04g3752 368 Pfam No apical meristem (NAM) protein 11 138 IPR003441 GO:0003677|GO:0006355
Aev04g3752 368 MobiDBLite consensus disorder prediction 177 198 - -
Aev04g3752 368 PANTHER PROTEIN BEARSKIN2-LIKE 4 307 IPR033519 -
Aev04g3752 368 MobiDBLite consensus disorder prediction 177 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3752 Aev-Chr4 34779191 34780946 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3752 4 364 NAC Transcription Factor Family AT1G33280 53.226 7.25e-123 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aev04g3752 NAM 7.5e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3752 - - adu:107477630 518.85