Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3734 ATGGCAATCATGGGAAAGATATTCTTGACAATGCTATTGCTGTCATCAATCATCTCAATAGGGTCATCATCAAGATCAAGGAGATCAGCATCTTCCAGGAGCAACATTGATTGGTGGTGCAACCGAACACCACACCCTGAGTCATGCAAATTCTACATGAAGCAGAGCCACCGCCATTACAGGGTGAAGCACAAAACAGAGTTCCGTTCAATTCTGGTTCACTTGGCCTTAGAGAGAGCACTGATCATGAAAAGGCAAGCACACAATTTGGGAGAGGACAATTCATCCAAGAAGCAGAGGTCAGTGTTCGGTGACTGCTTGAAGCTCTATGACAACACCGTGTTCCATCTGAACCGCACCCTCCATGGCCTTCACAACAAGAGAACCTCATGCTCACCGTTTGATGCGCAGACATGGCTCAGCACTGCCCTCACAAACATCGAAACATGTAAGAAAATAGCAACGGATCTAGGACTTGCGCATTTCATGGTGCCCAATGCCACCACCAATGTCACTGATATAATAAGCAATAGCTTGGCCGTGAACTCGGCTCTGCTGAGACTAGAAAAAGAGTATTCCACAGAGGAGGACACGGAAGAAGCGTTTCCGAGATGGTTTTCGATGCGTGATAGGAAGCTGTTGCAGTCTGCAACGATAAAGGCGCACCTTGTGGTGGCCAAAGATGGATCGGGACACTTCAGGACGGTGCAGGCAGCGATCAACGCGGCGGCGAGGAGGAGAATAAAGTCGAGGTTTATCATTCATGTGAAGAGAGGGGTGTATAGGGAGAACATTGAGGTTGACAAGACCAACGACAACATCATGCTGGTGGGTGATGGCATGAGATATACCATCATAGCAAGTGGCAGGAGTGTTCAACAAGGTTATACCACCTATAGCTCTGCAACTGCAGGGATTGATGGGCTTCACTTCATTGCACGTGACATCACCTTCAGGAACACGGCGGGTCCACTGAAGGGGCAAGCAGTGGCGCTACGGTCAGCGTCGGATCTGTCCGTGTTCTACCGCTGCGCAATCGACGGCTACCAAGACACGCTGATGGCTCACGCACAGCGCCAATTCTACAGAGGCTGCTACATCTTCGGCACCGTCGACTTCATCTTCGGCAACGCCGCCGTGGTTTTTCAGAACTGCGTGATTCTCGTGAGAAGGCCTTTGAATGGCCAGGCCAACATGATCACGGCCCAAGGTCGAGGTGATCCGTTTCAAAACACGGGCATCTCAATCCATAACTCTCAGATTCGGGCCGCACCCGATCTCAGGCCTGTTGTGAATAACTTCAAGACCTTCTTGGGCCGGCCCTGGCAGCAGTACTCAAGAGTGGTGGTCATGAAAACCTACATGGACTCCTTGGTGAGCCCGTCGGGCTGGTCTCCTTGGGGGAACACTAATTTTGCTCAAAGCACCTTGTTTTACGGAGAGTACAGGAACGTTGGGCCTGGATCATCGACAAAGAACAGGGTCCGGTGGCCCGGTTATCATGTTCTGACAACACCTGCTCAGGCTTCACCTTTTACGGTGTCCAGCCTCCTTGCCGGCGGCACGTGGTTACCTGCCACCGGCGTGCCATTCACTTCTGGCCTTTAA 1608 0.5137 MAIMGKIFLTMLLLSSIISIGSSSRSRRSASSRSNIDWWCNRTPHPESCKFYMKQSHRHYRVKHKTEFRSILVHLALERALIMKRQAHNLGEDNSSKKQRSVFGDCLKLYDNTVFHLNRTLHGLHNKRTSCSPFDAQTWLSTALTNIETCKKIATDLGLAHFMVPNATTNVTDIISNSLAVNSALLRLEKEYSTEEDTEEAFPRWFSMRDRKLLQSATIKAHLVVAKDGSGHFRTVQAAINAAARRRIKSRFIIHVKRGVYRENIEVDKTNDNIMLVGDGMRYTIIASGRSVQQGYTTYSSATAGIDGLHFIARDITFRNTAGPLKGQAVALRSASDLSVFYRCAIDGYQDTLMAHAQRQFYRGCYIFGTVDFIFGNAAVVFQNCVILVRRPLNGQANMITAQGRGDPFQNTGISIHNSQIRAAPDLRPVVNNFKTFLGRPWQQYSRVVVMKTYMDSLVSPSGWSPWGNTNFAQSTLFYGEYRNVGPGSSTKNRVRWPGYHVLTTPAQASPFTVSSLLAGGTWLPATGVPFTSGL* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3734 535 Gene3D - 216 535 IPR012334 -
Aev04g3734 535 SUPERFAMILY Pectin lyase-like 217 534 IPR011050 -
Aev04g3734 535 PANTHER PECTINESTERASE 1 534 - -
Aev04g3734 535 SMART PMEI_2 31 181 IPR006501 GO:0004857
Aev04g3734 535 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 185 IPR006501 GO:0004857
Aev04g3734 535 Pfam Pectinesterase 223 520 IPR000070 GO:0030599|GO:0042545
Aev04g3734 535 CDD PMEI-like_3 38 187 - -
Aev04g3734 535 ProSitePatterns Pectinesterase signature 2. 367 376 IPR033131 -
Aev04g3734 535 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 185 IPR035513 -
Aev04g3734 535 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 186 IPR035513 -
Aev04g3734 535 PANTHER PECTINESTERASE 1 534 - -
Aev04g3734 535 Pfam Plant invertase/pectin methylesterase inhibitor 35 180 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3734 Aev-Chr4 34687195 34689488 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3734 29 535 Carbohydrate Esterase AT5G51490 58.869 0.0 632
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3734 K01051 - gmx:100807908 831.247
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3734 04 34687195 34689488 Aev04g3734 04 34687195 34689488 ECH