Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3733 ATGGCTCGTGGAAAGGTTCAGCTGAAGAGAATAGAGAACCCGGTGCACAGGCAGGTTACCTTCTGCAAGCGCCGAGCAGGGCTTCTTAAGAAGGCTAAGGAGCTCTCTGTCCTTTGCGATGCTGAAATTGGCCTCGTCATTTTCTCCGCTCATGGAAAGCTCTTTGAATTGGCCACTAAAGGAACCATGCAAGGGCTCATAGAGAGGTACATCAAGTTCACAGGGGGAGCTCAGCCTGTAGAACCATCATCACATCCTCTGGATTCTAGCAAAGAGGAAGCTGATGTGCTGAAACAGGAAATCGACACGCTGCAAAAGGGTATCAGGTATTTGTTTGGAGGAGCAATTGGGACAATGTCAATGGATGAATTACAAGTGCTAGAGAAGAATCTTGAAACTTGGATTTATCATATTCGTTCAGTGAAGATGAACATCATGTTGCAAGAAATTCAAGCTTTGAGAGATAAGGAGGGAACACTCAAAGCGGCAAATAAGTATCTCCATGATAAGATTTTGGAGAATACGACTAGTGCATATACTACTACTACTACTAACTTTGCTCCATTTGCTACTGATGCTTCGTACCCGCTAACTATACAAGATGGAATTTTTCAGTTCTAG 621 0.438 MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLVIFSAHGKLFELATKGTMQGLIERYIKFTGGAQPVEPSSHPLDSSKEEADVLKQEIDTLQKGIRYLFGGAIGTMSMDELQVLEKNLETWIYHIRSVKMNIMLQEIQALRDKEGTLKAANKYLHDKILENTTSAYTTTTTNFAPFATDASYPLTIQDGIFQF* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3733 206 PANTHER AGAMOUS-LIKE MADS-BOX PROTEIN AGL12 1 206 - -
Aev04g3733 206 ProSiteProfiles K-box domain profile. 87 177 IPR002487 GO:0003700|GO:0005634|GO:0006355
Aev04g3733 206 PANTHER SERUM RESPONSE FACTOR HOMOLOG 1 206 - -
Aev04g3733 206 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Aev04g3733 206 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Aev04g3733 206 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Aev04g3733 206 Gene3D - 15 77 IPR036879 GO:0003677|GO:0046983
Aev04g3733 206 CDD MADS_MEF2_like 2 78 IPR033896 GO:0000977|GO:0045944
Aev04g3733 206 Pfam K-box region 88 171 IPR002487 GO:0003700|GO:0005634|GO:0006355
Aev04g3733 206 Coils Coil 87 107 - -
Aev04g3733 206 SUPERFAMILY SRF-like 1 75 IPR036879 GO:0003677|GO:0046983
Aev04g3733 206 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Aev04g3733 206 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
Aev04g3733 206 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 56 IPR002100 GO:0003677|GO:0046983
Aev04g3733 206 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3733 Aev-Chr4 34682850 34684521 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3733 1 206 MADS-box Gene Family AT1G71692 62.617 2.60e-84 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Aev04g3733 K-box 4.6e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3733 - - gmx:100815314 316.62