Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3719 ATGGAGAAAAAAGAGAGTAAGGTCTGTGGGATCTGCAACAAGCGCTTCTCCAGTGGAAAAGCCATAGGAGGCCACATGAGATCACACTACGTCAAATTGCCAGTCCCTCCCAAGCCTGAGACGAAGAATCAAGCGCTGGACAATTCCACTGAGCTAACCCTCAGTCCTATCAACCAGAAAACAACACCAAATTTCCAACCTTTGAAACGCAGCAGCCCCTTTTCCTGCTTGCCAGACTCGGACAGAGAAAATGGATTTCTGCTCTACCCTAAATACCCGACCCGCAAAAGATCCAAATGCCGCCGCAGGTTTATTGCTTCAGCTGAGAAAAACGCTGAACCAAAAGAAGCGAGTTCAGCAAGTGAAACCCTTGTTACAGAACAAGCTGCTAGGTGTCTAATGAGGATGACCAAGGATAAATGGCCAGAAAGCAAGGAGATCAAGACACCAAAAATGGAAGCAGCCAACAAAATGGAAGAAAAAGATGAGCACACTGAAGCCAGGTTCAAGTGCGAGATATGCCCAAAAGTATTCCAATCTGCTCAAGGTCTGGGGGGACACAGAGCAATGCATAGGAGAATTCTGAATCTATCACAAGAAGGTGGTAGCATTGAAGGTGGTGGAAGTAGCAACATGACTGCTGATGTAGATCAAAATTTCATCAAGTGTCCATTCTGCTCTATGTTGTTCAAGTCTGCTCAAGCAGTTGGGGGGCACAAGAAGGTACATCTTCACAATCCTATGGTTGCCAATACTGACACCACTGCAGATCAATTCAGTAATAAGTCGCTAGATCTTAATTTTCCTGCTCCTGGAGAAGATGAAGAGGTGAGCCAAATCGAATTTTCAACAGCGGCCAGCAGAGAGTGA 870 0.4586 MEKKESKVCGICNKRFSSGKAIGGHMRSHYVKLPVPPKPETKNQALDNSTELTLSPINQKTTPNFQPLKRSSPFSCLPDSDRENGFLLYPKYPTRKRSKCRRRFIASAEKNAEPKEASSASETLVTEQAARCLMRMTKDKWPESKEIKTPKMEAANKMEEKDEHTEARFKCEICPKVFQSAQGLGGHRAMHRRILNLSQEGGSIEGGGSSNMTADVDQNFIKCPFCSMLFKSAQAVGGHKKVHLHNPMVANTDTTADQFSNKSLDLNFPAPGEDEEVSQIEFSTAASRE* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3719 289 Gene3D Classic Zinc Finger 166 243 - -
Aev04g3719 289 ProSiteProfiles Zinc finger C2H2 type domain profile. 7 34 IPR013087 -
Aev04g3719 289 Pfam C2H2-type zinc finger 9 29 - -
Aev04g3719 289 Pfam C2H2-type zinc finger 168 193 - -
Aev04g3719 289 Pfam C2H2-type zinc finger 222 243 - -
Aev04g3719 289 PANTHER ZINC FINGER PROTEIN ZAT1-RELATED 1 275 IPR044303 GO:0006355
Aev04g3719 289 SMART c2h2final6 169 191 IPR013087 -
Aev04g3719 289 SMART c2h2final6 7 29 IPR013087 -
Aev04g3719 289 SMART c2h2final6 221 243 IPR013087 -
Aev04g3719 289 MobiDBLite consensus disorder prediction 268 289 - -
Aev04g3719 289 PANTHER C2H2 AND C2HC ZINC FINGER PROTEIN 1 275 - -
Aev04g3719 289 ProSitePatterns Zinc finger C2H2 type domain signature. 171 191 IPR013087 -
Aev04g3719 289 ProSitePatterns Zinc finger C2H2 type domain signature. 9 29 IPR013087 -
Aev04g3719 289 SUPERFAMILY beta-beta-alpha zinc fingers 8 191 IPR036236 -
Aev04g3719 289 ProSiteProfiles Zinc finger C2H2 type domain profile. 169 191 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3719 Aev-Chr4 34591012 34591881 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3719 5 280 C2H2 Transcription Factor Family AT3G60580 32.558 2.91e-32 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev04g3719 zf-C2H2_6 1.3e-07 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3719 - - adu:107495627 235.728