Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3718 ATGGAAGAACCACCAGCCATGGAGGCCGAGGCAACTTCTAGGGTTTCACCTGCTCCTCCTTATCTGCAGCAGCAGCAGCACACCGCTGGGATCATCAAGAGGATCCGATTGGAGAACTTCATGTGTCATTCCAACTTCGAGATGGAGTTCGGAGATGCCGCCAATTTCATTCTCGGTCAAAACGGAAGTGGGAAGAGTGCCATCCTAACTGCGCTATGTGTTGCATTTGGTTGTCGAGCTAAAGGGACTCAAAGGGCGTCCACATTGAAGGATTTCATTAAAAGTGGCTGCAGTAATGCTGTCATCCATGTTGAAATTCAAAATGAAGGAGAAGATGCTTTCAAGCCTGAAATATATGGTGATGTTATAATTATTGAACGTAGGATATCTGAATCCACAAGCTCCACTACATTAAAAGACCACCAAGGAAAGAAAGTAGTCAGTCGGAAAGCAGATCTTCAAGAAATCATTGAACATTTTAATATTGATGTGGAGAATCCATGTGTAATTATGAGTCAAGACAAAAGCAGAGAATTTTTGCATTCTGGGAATAACAAAGATAAATTTAAGTTTTTTTACAAGGCCACACTTCTACAGCAAGTCAATGATCTTCTGGAAAGCATTTCTAAGGAAATAGAATATGCACGTATCATAGTTGAAGAATTGGCAGGTGCAATAAGGCCCATTGAGAAGGAGCTTAGTGAGCTGGAAGTTAAAATTAAAGAAATGGAACAGGTTGAACAAATGTCTGAAAAGGCCCAGCAGTTAAAGAAGAAACTTGCATGGTTATGGGTTTATGAAGTGGATAAGGATCTTCAGAGTAAAAATATAATGATTGATAAGTTAAAAAACCGGATACCTGCTTGCCAAGCTAAGATTGATCAGCACCTGCATGAGATTGAAAAATTGGAGGAAAGCTGCTCCAAGAAGAAAGATGAAATTGCTGGTATGTTGGAAACAACAACACAACTTAATAGAATGACAGAAGATTTAAAGCACTCTATGTCCTTGGCTACGAAAGAAGTGTTCAAACTTGAACAAGATATCAAATGCAAAACTAGCAGCAAAGACAAGATATTAGATCAACTTAAAATACTCCAACAACAAGTCCAGGATATTCAAGAGCAGCATGTCAAACATACTCAGGCTGAAAAATCTGTCCTGGAGGAGAAACTGATGGGTCTCCATGAAGAGGTGCATGCTGCTGAGCAAGATTGGGAAAGGTTGAAGGAAGAAGTGACCATGTTATCGAGCCACATTCATGGGCAAGACGCTGATATCAAAATGATTGGTAATAAGATCCAATATCATGAAAACAAGTATCGTGATATCTCCAAGAATATCCGTGATCTTGAACAAAGCAAAATCAACAAGATTTCAGCATTTGGAGGCAATAAGGTGATGAGTCTGTTAGAAAAAATTGAGAAATATCACCGAAGGTTTAAGATGCCACCGATTGGTCCAATTGGTGCTCATTTGAAGCTGCTTAATGGTGAAAAATGGGCAGTTGCTGTTGAACATGCCATTGGGAGAATGCTCAATTCTTTTATAGTGACCGATCATAAAGATTTTCACCTTCTAAAACAATGTGCAAAGGAAGCAAACTATGGCCATCTTCAAATCATTATTTATGATTTTTCAACACCAAGGTTGACAATACCACAGCACATGGTTCCTATTACAGATTATCCATCAACCCTTTCTATCTTACAATCTGAGAACCACACTGTAATTAATGCCTTGGTGGACCTGGGAAATGTGGAGAGACAACTGCTTGTAGAGGATTATGATACTGGAAAAAGGGTAGCCTTTGAACAAAGGATCCGAAATCTGAAGGAAATCTACACTGCAACAGGACAGAAAATATTTTCTCGAGGTAATGTGCAGACTGTCCTTCCACCAAATATTAGGATAAAAGCTGGCCGTCTATGTAGTTCTTTTGAAAAAGAGATTGAGAAACTTCAAATTGAAGCATCCACTGTGCAAGAGGCAGCCAATGAATTTAAAAGGAGTAAAAGAGAGGCAGAGATCAAGCTTGAGGATCTTCAGAGAAATCTGACTTCTGTAAAGAGGCGTTATGACACAGCAGGAAGAATTGTAACTTCTAAGAGAGTAGCTTTGGAGGAGGCAGAGCAACAGCATGCTGCTGAAAATAGCTCAATACCTTCATCATCTGTTGAGGAGCTTAATGAAGAAATTACAGAAGTTCAGAAGAAATTAAAAGAAGAGGAAATATTGTTGGAAGGCCTTAAGCAAAAGAGGCAGGAAGCATCTATTAAAGCAGATCATCTCAAAGTAGAATTTGACAAGCTGTGTGAGTCGGCAAAAGGGGATATTGCTGCGTATAAGTCAGCAGAGGATCAACTTATGAAGCTTGAAAGCGAATTGGAATCGGCAGTTGATGGTAAAAAGCATTATGATGGTGTCATGGAAAAACAGGTTCTTTATATTAAGAAGGCAGAGGAAGAGTACCAAGAGCTTACAAAAAAGCGTGAGGAAAGCGCTAAAAAGGCTTCCATAATTTGCAGTGAGGCTGATCTTAATTCATTAGAAGGCTGTGATGGGGAAACCCCGGCAAAAATCAGTGCCCAATTAGAAAATCTAAATCAGATAGTTCAGCGTGAGAGCCGAAGGTACACTGAAACAATTGGTGATCTTAGGAGTCTTTATGATAAAAAGGAACGTAAGATTAAAAAAAGGCAGCAAGTGTACAAAGATCTTCGACAGAAATTGGATGCATGCCAGAGAGCCTTAGAGATACGAGGGAGCAAGTTTAAGAGGAATGCATCTTATCTGAAGCAACAACTTTCTTGGAAATTTAATGGCCATTTGAGAAAGAAAGGGATCAGTGGACTCATCAAAGTTAATTATGAGGAGAAAACCTTATCTATTGAGGTACAAATGCCTCAAGATGCATCAAACAAAGCTGTTCGAGACACCAGAGGGCTTTCAGGTGGAGAGCGCTCTTTTTCAACATTGTGCTTTGCATTAGCGCTTCATGAAATGACAGAAGCCCCTTTTAGAGCAATGGATGAATTTGACGTCTTCATGGATGCAGTAAGCCGTAAAATCAGCTTGGACACACTGGTTGATTTTTCTGTGGCACACGGATCGCAGTGGTTATTCATCACCCCGCATGATACTAGCATGGTGAAGGCGGGACCCAAGGTAAAGAAGCTGCAAATGCAAGCTCCACGTTCTTGA 3204 0.4011 MEEPPAMEAEATSRVSPAPPYLQQQQHTAGIIKRIRLENFMCHSNFEMEFGDAANFILGQNGSGKSAILTALCVAFGCRAKGTQRASTLKDFIKSGCSNAVIHVEIQNEGEDAFKPEIYGDVIIIERRISESTSSTTLKDHQGKKVVSRKADLQEIIEHFNIDVENPCVIMSQDKSREFLHSGNNKDKFKFFYKATLLQQVNDLLESISKEIEYARIIVEELAGAIRPIEKELSELEVKIKEMEQVEQMSEKAQQLKKKLAWLWVYEVDKDLQSKNIMIDKLKNRIPACQAKIDQHLHEIEKLEESCSKKKDEIAGMLETTTQLNRMTEDLKHSMSLATKEVFKLEQDIKCKTSSKDKILDQLKILQQQVQDIQEQHVKHTQAEKSVLEEKLMGLHEEVHAAEQDWERLKEEVTMLSSHIHGQDADIKMIGNKIQYHENKYRDISKNIRDLEQSKINKISAFGGNKVMSLLEKIEKYHRRFKMPPIGPIGAHLKLLNGEKWAVAVEHAIGRMLNSFIVTDHKDFHLLKQCAKEANYGHLQIIIYDFSTPRLTIPQHMVPITDYPSTLSILQSENHTVINALVDLGNVERQLLVEDYDTGKRVAFEQRIRNLKEIYTATGQKIFSRGNVQTVLPPNIRIKAGRLCSSFEKEIEKLQIEASTVQEAANEFKRSKREAEIKLEDLQRNLTSVKRRYDTAGRIVTSKRVALEEAEQQHAAENSSIPSSSVEELNEEITEVQKKLKEEEILLEGLKQKRQEASIKADHLKVEFDKLCESAKGDIAAYKSAEDQLMKLESELESAVDGKKHYDGVMEKQVLYIKKAEEEYQELTKKREESAKKASIICSEADLNSLEGCDGETPAKISAQLENLNQIVQRESRRYTETIGDLRSLYDKKERKIKKRQQVYKDLRQKLDACQRALEIRGSKFKRNASYLKQQLSWKFNGHLRKKGISGLIKVNYEEKTLSIEVQMPQDASNKAVRDTRGLSGGERSFSTLCFALALHEMTEAPFRAMDEFDVFMDAVSRKISLDTLVDFSVAHGSQWLFITPHDTSMVKAGPKVKKLQMQAPRS* 1068
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3718 1067 CDD ABC_SMC6_euk 945 1067 - -
Aev04g3718 1067 CDD ABC_SMC6_euk 32 186 - -
Aev04g3718 1067 Coils Coil 434 454 - -
Aev04g3718 1067 Coils Coil 890 917 - -
Aev04g3718 1067 Coils Coil 356 412 - -
Aev04g3718 1067 Gene3D - 803 1063 IPR027417 -
Aev04g3718 1067 Coils Coil 726 767 - -
Aev04g3718 1067 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 31 329 IPR027417 -
Aev04g3718 1067 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 32 1045 IPR027417 -
Aev04g3718 1067 Coils Coil 810 837 - -
Aev04g3718 1067 SUPERFAMILY Smc hinge domain 468 627 IPR036277 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Aev04g3718 1067 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 24 1067 - -
Aev04g3718 1067 Coils Coil 226 259 - -
Aev04g3718 1067 Coils Coil 279 320 - -
Aev04g3718 1067 Gene3D - 32 286 IPR027417 -
Aev04g3718 1067 Coils Coil 782 802 - -
Aev04g3718 1067 Pfam RecF/RecN/SMC N terminal domain 32 1062 IPR003395 -
Aev04g3718 1067 Coils Coil 644 692 - -
Aev04g3718 1067 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 6B 24 1067 IPR027132 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3718 Aev-Chr4 34569913 34584689 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3718 24 1067 Structural Maintenance of Chromosomes family AT5G61460 56.077 0.0 1148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3718 K22804 - gmx:100816916 1420.6