Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3713 ATGGAAGCGGCGGTGGTCGACGTCGGAACTAAGCTCCTCAAAGCGGGTTTCGCAATTCCTGATCAGACTCCCGCCATGATAATTCCTACTCAGATGAAACGAGTGCCTGATGATGGGTCTGTGACTGATAATAGTTCACTTGCTGAAGCTGAAACTGATGGTGTCACGATTGATCCAGTGGTGCGAGGATTTATTAGGGATTGGGACGCCATTGAGGATTTGCTGCACTATGTCTTGTATACCGGCCTCGGATGGGAAATCGGCAATGAAGGACAAATACTCTTTACAGATCCACTCTGCACCCCCAAGGCCAACAAGGAACAATTAGTGCAGCTAATGTTTGAAACATTCAACATATCAGGGTTTTATGCGTCAGAACAAGCAGTTTTATCGCTGTATGCTGTGGGACGTATCTCAGGGTGCACGGTTGATATTGGACATGGAAAAATAGATATTGCGCCAGTAATTGAGGGTGCAGTTCACCACATTGGATCAAGAAGATTTGAGTTCGGAGGTATCGATCTAACCAATTTCTTGGCCCAAGAACTTGGCAAATCCAATCCACAAGTAAACATCAGCATGTCTGATGTGGAGAAAATCAAAGAGCAATACTCATGTTGTGCAGAAGATGAATTAGCTTATCAGAAGACCAAAGATTCTTGTCCTGTCGAGAAACATACCCTTCCTGATGGACAGGTGATTACAATTGGGAGAGAAAGATACACTGTTGGCGAGGCTTTATTCCAGCCAAGTCTATTGGGCCTAGAGGCTCATGGCATTGTTGAGCAACTTGTTCGTGCTATTTCAACTATGTCGTCTGATAATCATCGGCAGCTGCTGGAAAACACTGTTGTGTGTGGTGGCACTTCTTCTATGACCGGCTTTGAAGAGAGATTTCAGAAGGAATCTAGCTTAAGTTCATCTGCCGTTCAACCTACCCTTGTTAAGCCTCCGGAATACATGCCAGAAAACTTAACCCTGTATTCTGCATGGGTGGGAGGTGCCATACTTGCCAAAGTAGTTTTCCCTCAGAATCAGCATATAACTAAGGGAGATTATGATGAAACTGGTCCTTCCATTGTTCACCGGAAATGCTTCTGA 1101 0.4487 MEAAVVDVGTKLLKAGFAIPDQTPAMIIPTQMKRVPDDGSVTDNSSLAEAETDGVTIDPVVRGFIRDWDAIEDLLHYVLYTGLGWEIGNEGQILFTDPLCTPKANKEQLVQLMFETFNISGFYASEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVHHIGSRRFEFGGIDLTNFLAQELGKSNPQVNISMSDVEKIKEQYSCCAEDELAYQKTKDSCPVEKHTLPDGQVITIGRERYTVGEALFQPSLLGLEAHGIVEQLVRAISTMSSDNHRQLLENTVVCGGTSSMTGFEERFQKESSLSSSAVQPTLVKPPEYMPENLTLYSAWVGGAILAKVVFPQNQHITKGDYDETGPSIVHRKCF* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3713 366 PRINTS Actin signature 105 118 IPR004000 -
Aev04g3713 366 PRINTS Actin signature 130 149 IPR004000 -
Aev04g3713 366 PRINTS Actin signature 222 238 IPR004000 -
Aev04g3713 366 PRINTS Actin signature 50 72 IPR004000 -
Aev04g3713 366 SUPERFAMILY Actin-like ATPase domain 2 143 IPR043129 -
Aev04g3713 366 Gene3D Actin; Chain A, domain 4 170 257 - -
Aev04g3713 366 Pfam Actin 2 366 IPR004000 -
Aev04g3713 366 Gene3D - 128 329 - -
Aev04g3713 366 PANTHER BNACNNG31150D PROTEIN 1 365 - -
Aev04g3713 366 PANTHER ACTIN 1 365 IPR004000 -
Aev04g3713 366 CDD NBD_sugar-kinase_HSP70_actin 62 173 - -
Aev04g3713 366 SMART actin_3 1 366 IPR004000 -
Aev04g3713 366 SUPERFAMILY Actin-like ATPase domain 136 366 IPR043129 -
Aev04g3713 366 Gene3D - 5 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3713 Aev-Chr4 34530666 34533471 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3713 1 366 Cytoskeleton Gene Families AT3G18780 37.203 2.77e-70 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3713 K16615 - gmx:100813266 678.707