Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3676 ATGGGCACACGACCCCAACAACCTTGTCATGAGGAAGAGGATGAGGAGGTGCCTGGTCGTGGAACAACAATCTCAAGTCAATCAATGTCAACAAGCAGGAGTGTGGGGTCGCCGTCCAGCCGGAGTGAGCAGACAATGGCGACACCTGCTAGTGATAGCACTTTTCTCAGATTAAACCATCTTGACATTCATGGTGATGATGCTGGATCACAGGGAGCAGTTGGTAGCAAGAAGAAAAAGAGAGGTCAACGTGCTGTTGGAGGTGATAAGAGTGGAAGAGGGCTCCGCCAATTTAGTATGAAAGTGTGTGAGAAGGTGGAAAGCAAGGGAAGAACAACATACAATGAGGTAGCAGATGAACTCGTGGCTGAATTTTCTGACCCAGGCAATGGTGTTTCATCCCCTGATCAGCAACAATATGATGAGAAAAACATTCGTCGAAGGGTCTATGATGCTTTGAATGTTCTCATGGCGATGGATATTATTTCTAAGGATAAAAAGGAAATACAATGGAAGGGTCTCCCTCGTACTAGTATAAGTGATGTTGAGGAACTAAAGGCAGAGCGTCTTGGGCTGCGGAATAGAATTGAAAAGAAAACAGCCTACTTGCAAGAGCTGGAGGAGCAATACATAGGTCTTCAGAACCTCATAAAACGAAATGAGCAGTTGTGTAGCTCTGGAAATGCTCCCAGTGGAGGTGTATCTCTGCCTTTTATTATTGTTCAGACACGTCCTAATGCAACTGTTGAAGTGGAAATATCAGAAGATATGCAGCTTGTGCATTTTGATTTCAACAGTACTCCTTTTGAGCTGCATGATGACAACTATGTTCTCAAGGCAATGAAGCTTTGTGATAGGCCTCAGAATGATAATGTAACACCAAATGTTACAGATGCAGGTGAAGGTTCTAGCATGTCTGGTTTACACCATCATGCCCAGGTTTCTACTTTTGTTTCAAACCCATCTGTTAGGGCCCCCACTTCATCATCACCACCACTTCCTGGAATATTAAAGGCCAGAATTAAGCCTGAGCATTAG 1038 0.4432 MGTRPQQPCHEEEDEEVPGRGTTISSQSMSTSRSVGSPSSRSEQTMATPASDSTFLRLNHLDIHGDDAGSQGAVGSKKKKRGQRAVGGDKSGRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFSDPGNGVSSPDQQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSISDVEELKAERLGLRNRIEKKTAYLQELEEQYIGLQNLIKRNEQLCSSGNAPSGGVSLPFIIVQTRPNATVEVEISEDMQLVHFDFNSTPFELHDDNYVLKAMKLCDRPQNDNVTPNVTDAGEGSSMSGLHHHAQVSTFVSNPSVRAPTSSSPPLPGILKARIKPEH* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3676 345 CDD DP_DD 178 281 IPR014889 -
Aev04g3676 345 SUPERFAMILY E2F-DP heterodimerization region 180 295 IPR037241 -
Aev04g3676 345 Gene3D Transcription factor DP 179 310 IPR038168 -
Aev04g3676 345 Pfam E2F/DP family winged-helix DNA-binding domain 93 173 IPR003316 GO:0005667|GO:0006355
Aev04g3676 345 Coils Coil 189 223 - -
Aev04g3676 345 PANTHER TRANSCRIPTION FACTOR DP 15 345 - -
Aev04g3676 345 MobiDBLite consensus disorder prediction 288 307 - -
Aev04g3676 345 SMART E2F_TDP_2 90 173 IPR003316 GO:0005667|GO:0006355
Aev04g3676 345 SMART DP_2 180 343 IPR014889 -
Aev04g3676 345 Pfam Transcription factor DP 181 314 IPR014889 -
Aev04g3676 345 SUPERFAMILY "Winged helix" DNA-binding domain 93 174 IPR036390 -
Aev04g3676 345 PIRSF Txn_factor_DP 4 345 IPR015648 GO:0005667|GO:0051726
Aev04g3676 345 Gene3D - 85 178 IPR036388 -
Aev04g3676 345 MobiDBLite consensus disorder prediction 319 345 - -
Aev04g3676 345 MobiDBLite consensus disorder prediction 287 307 - -
Aev04g3676 345 PANTHER TRANSCRIPTION FACTOR DP 15 345 IPR015648 GO:0005667|GO:0051726
Aev04g3676 345 MobiDBLite consensus disorder prediction 20 55 - -
Aev04g3676 345 MobiDBLite consensus disorder prediction 1 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3676 Aev-Chr4 34311428 34314488 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3676 74 289 E2F-DP Transcription Factor Family AT5G02470 52.535 1.58e-76 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF E2F-DP Aev04g3676 DP 4.3e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3676 K04683 - gmx:100781272 564.688