Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3644 ATGATGGGAAGAAGAGGTAGCCGAGATGAGAATGGATTGAAGAAGGGTCCATGGAGCCCAGAAGAGGACAGAGTGTTGGTGGATTACATAAAGAGACATGGTGGGCATGGAAGCTGGAGGGCAGTCCCCAAGCTGGCAGGGCTGAACCGGTGTGGCAAGAGCTGCAGGCTGAGATGGACTAACTATTTGAGGCCTGACATCAAGAGAGGCAAATTCTCGGAGGATGAGGAACAAGTCATCTTCAATATGCATGCACTCCTGGGCAACAAGTGGGCAGCAATAGCAAGTCATCTTGCAGGGAGGACGGACAATGATATAAAGAACTTCTGGAACACGCATATGAGGAGGAAGCTTCTTCAGAAGGGGTTAGATCCTGTGACGCATCGTCCACGATCATCGTCAGATCATGGTCATGGTGCTCATCTCGTCTCACTTCTTCAGAGGTTGTTGGGTGCTGCAAACATTGTCAGTGCTCTCATCACCAACACCAACGCCAACGCTACTGATGATGCCACCCGACTCCACAACATGCTCCATCATCTCCTTCTATTTGCTTCCAATAACAATAACAATAATAATGCACCAGGACCAATCTTATCACCATCTTCAATTCCAAATGCTGCTGCTGCTGCTTTATATGAAGCTTTAGGATTGATCAACAATAATAATAATAAGCTTGACCATAACCTTTACAATACCCTTTTTCCTTCTCCTCACCATCTTCAAAATGAAACACATTTCCAAAGCTTTGATGTTCCTCCTCCTGATCATCAAAAGGTTGGTGATGATGAACAAGTACAAGTTATTGTTGATGATGCAATTACACCGCCATTCAACAACAATAATAATAACTCGCTACTACTTATTCCAAATCTGGTTTCATCAGCTCAAGAATGTTCCACTAATAAGCAAATGGGAATCAATAATAATAATAATAATAATCCAAATGATGAGGGCTTCAACAACACAACAGCTTGCTCTTCTTCTTCCACAACTTCAACCACCTTTCAAATGTTGGCAGATTTCATTAACGAAGAAGCACCCATAACCAATGCTTATTATTGGAAGGATATCATTCCGTAA 1083 0.4284 MMGRRGSRDENGLKKGPWSPEEDRVLVDYIKRHGGHGSWRAVPKLAGLNRCGKSCRLRWTNYLRPDIKRGKFSEDEEQVIFNMHALLGNKWAAIASHLAGRTDNDIKNFWNTHMRRKLLQKGLDPVTHRPRSSSDHGHGAHLVSLLQRLLGAANIVSALITNTNANATDDATRLHNMLHHLLLFASNNNNNNNAPGPILSPSSIPNAAAAALYEALGLINNNNNKLDHNLYNTLFPSPHHLQNETHFQSFDVPPPDHQKVGDDEQVQVIVDDAITPPFNNNNNNSLLLIPNLVSSAQECSTNKQMGINNNNNNNPNDEGFNNTTACSSSSTTSTTFQMLADFINEEAPITNAYYWKDIIP* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3644 360 Pfam Myb-like DNA-binding domain 69 113 IPR001005 -
Aev04g3644 360 Pfam Myb-like DNA-binding domain 15 63 IPR001005 -
Aev04g3644 360 Gene3D - 14 68 - -
Aev04g3644 360 CDD SANT 17 63 IPR001005 -
Aev04g3644 360 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Aev04g3644 360 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 63 IPR017930 -
Aev04g3644 360 Gene3D - 70 137 - -
Aev04g3644 360 SUPERFAMILY Homeodomain-like 12 110 IPR009057 -
Aev04g3644 360 MobiDBLite consensus disorder prediction 306 327 - -
Aev04g3644 360 CDD SANT 71 114 IPR001005 -
Aev04g3644 360 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Aev04g3644 360 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 4 359 - -
Aev04g3644 360 PANTHER TRANSCRIPTION FACTOR MYB39-LIKE 4 359 - -
Aev04g3644 360 ProSiteProfiles Myb-like domain profile. 10 63 IPR001005 -
Aev04g3644 360 SMART sant 14 65 IPR001005 -
Aev04g3644 360 SMART sant 68 116 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3644 Aev-Chr4 34088143 34089309 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3644 2 359 MYB Transcription Factor Family AT5G16770 43.243 1.34e-79 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev04g3644 Myb_DNA-binding 1.3e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3644 K09422 - gmx:547488 290.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3644 04 34088143 34089309 Aev04g3644 04 34088143 34089309 ECH