Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3643 ATGATTATGGGGAGAAGAGGAAGGCGTGAGGATAAGTGTGGAGTGAAGAAGGGTCCATGGAGCCCAGAAGAGGATAAAACATTGGTGGATTACATAAAGGAACATGGGCATGGGAGTTGGAGAGACATTCCAAAGCTTGCAGGGCTTAACAGGTGTGAGAAGAGTTGCAGGCTGAGGTGGACCAATTATTTGAGGCCTAATATCAAAAGAGGAAGATTCTCTGACCAGGAGCAACAGATCATCATCAACTTACATGCACTTCTTGGGAATAAATGGTCAACAATAGCAAGTCATCTTCCGGGAAGAACAGACAATGACATAAAGAATTTGTGGAACACTCACCTGAGGAGAAAGCTTGTTGAAAAGGGGTTAGATCCAATAACACACGATCCAATTAGATCAGCATCAGCATCATCATCAGAGCAATGTGATCTTGTGTCACTTCTTCAGCAGTTGCTGGGTGCTGCAAACATTGTCAGCGGACTTATCACAAACACCTGGGATGCACCAAATGCTTTAAGGCTAAACTCATCACTAGATACCAATAATAATAATGCCACGGTACAACAACAATTAGCCAAGCTCCAAATGCTTCAGAACATGCTTAATCAAGTCCTGAGTTCCAATAATAGTAGTAGTAATCCTGCTCCAAATAATAATAATCCGTTATATGAAGCTTTAGGATTTAATAATAATAATGATGATGGTTCAACTGATGCTCTGTTTCCTTGTTGTGCCACTCAAAACCAAACAAGTTTCCAAAACTTTGAGCAAACAGGGGAATATCCTACTCCTCCAAATTGTAGTAGCATTATCATGAAGGATGATGAGCAAATAGTAGTACTTGATGCAACAACAAATAATAATAATAATAATAATAATTCTGGTCCCACAAATACAGTTATCATACCATTCAATCTTTTTCCAAAACTCGTTTCAGCCTCATCACCTCAATGTTCCAATGCTGCTAATAACAACATAGGAATCAGTAATAATAATAATAATAACCCTTGTTCTTCCACTCCAACCACCTTTAAAACATGGGCATCATCGGATTTCATGTATGAAGAAGCAAGAGATCAAGCATCTTACTATTGGAAGGAGATCATGGAGTAA 1116 0.3898 MIMGRRGRREDKCGVKKGPWSPEEDKTLVDYIKEHGHGSWRDIPKLAGLNRCEKSCRLRWTNYLRPNIKRGRFSDQEQQIIINLHALLGNKWSTIASHLPGRTDNDIKNLWNTHLRRKLVEKGLDPITHDPIRSASASSSEQCDLVSLLQQLLGAANIVSGLITNTWDAPNALRLNSSLDTNNNNATVQQQLAKLQMLQNMLNQVLSSNNSSSNPAPNNNNPLYEALGFNNNNDDGSTDALFPCCATQNQTSFQNFEQTGEYPTPPNCSSIIMKDDEQIVVLDATTNNNNNNNNSGPTNTVIIPFNLFPKLVSASSPQCSNAANNNIGISNNNNNNPCSSTPTTFKTWASSDFMYEEARDQASYYWKEIME* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3643 371 MobiDBLite consensus disorder prediction 206 230 - -
Aev04g3643 371 MobiDBLite consensus disorder prediction 1 20 - -
Aev04g3643 371 ProSiteProfiles Myb-like domain profile. 12 64 IPR001005 -
Aev04g3643 371 CDD SANT 72 115 IPR001005 -
Aev04g3643 371 Gene3D - 72 119 - -
Aev04g3643 371 ProSiteProfiles Myb-like domain profile. 65 115 IPR001005 -
Aev04g3643 371 CDD SANT 19 64 IPR001005 -
Aev04g3643 371 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 64 IPR017930 -
Aev04g3643 371 Pfam Myb-like DNA-binding domain 70 115 IPR001005 -
Aev04g3643 371 Pfam Myb-like DNA-binding domain 17 64 IPR001005 -
Aev04g3643 371 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 11 369 - -
Aev04g3643 371 SMART sant 16 66 IPR001005 -
Aev04g3643 371 SMART sant 69 117 IPR001005 -
Aev04g3643 371 Gene3D - 15 70 - -
Aev04g3643 371 SUPERFAMILY Homeodomain-like 14 111 IPR009057 -
Aev04g3643 371 PANTHER TRANSCRIPTION FACTOR MYB39-LIKE 11 369 - -
Aev04g3643 371 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 65 119 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3643 Aev-Chr4 34079903 34081564 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3643 11 216 MYB Transcription Factor Family AT5G16770 53.883 6.68e-72 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev04g3643 Myb_DNA-binding 1.2e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3643 K09422 - gmx:100781707 288.885