Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3642 ATGATGGGGAGATTACCAGGAAGGCGAGAAGAAGAAGAGAATAATAATAGTGGAGTGAAGAAAGGTCCATGGACCCCAGAAGAGGATAGATTGCTGGTGGATTACATAAAGAAACATGGGCATGGAAGTTGGAGGGCACTTCCCAAGCTTGCAGGGCTCAACAGGTGTGGCAAGAGCTGTAGGCTTAGATGGACTAATTATTTGAGGCCTGACATCAAGAGAGGCAAATTCACTGATGAAGAAGAAAAACTCATCATCAGTATGCATGCAGTTCTTGGAAACAAGTGGTCAGCAATAGCAGGTAAACTGCCAGGGAGAACAGACAATGAAATAAAGAACTTCTGGAACACACATCTGAGGAAGAAGCTTCTGCAAATGGGGCTAGATCCAGTCACACACCGCCCTAAGACAGAGCACCTTGATCTCATCTCATACCTCAACCAATTGCTCACTGCGGCTAACATCATCACCGGCCTCACAACCAACGCTCCTTTTTGGCTCAACACTTCACAACAACAATCACCCAAACTCCAAATGCTTCACACTATGCTCCTTCAAATTCTTGCTTCCAATAATAATAACAACCACCCTGTTCTTCCAAATGTAGAATCATTACTACTCAACAACAACAATACTAATAATAATAATTTATTGCCATTAGAACCAATAGTACCACCACTTCCAAATGATTTATATGAAGCTGCTTTAGGATTAAATAATAATACTAATAATAATTTCCAAAACCTTATTGATTCCCCAAATAGTACTAGTTGCATCATGTATGAAAAGCTTATTGATGATAATGAAGAACAAGTATTTGATGCAACAACAAATTCTGTTCCCACAACACCACCGTCATTCACTAATTCCCTTCCAAATCTTGTTTCAGCCTCATCACCTCCTGAATGTTCCACCAATAATAATAATAATAATATTAAGCAAAGCAATGATGATGTCATGATTGATCCAAATGAGTTCTCTAACCCTTCTTCTTCAGCTACCTTTGGAATTTGGCCATCAGATTTTATATATGAAGAAGCAACCGATGTTTATTGGAACGGTCTCATAGGTGGTCGGGAATCTAACCATGGCCAGCCATAG 1101 0.3987 MMGRLPGRREEEENNNSGVKKGPWTPEEDRLLVDYIKKHGHGSWRALPKLAGLNRCGKSCRLRWTNYLRPDIKRGKFTDEEEKLIISMHAVLGNKWSAIAGKLPGRTDNEIKNFWNTHLRKKLLQMGLDPVTHRPKTEHLDLISYLNQLLTAANIITGLTTNAPFWLNTSQQQSPKLQMLHTMLLQILASNNNNNHPVLPNVESLLLNNNNTNNNNLLPLEPIVPPLPNDLYEAALGLNNNTNNNFQNLIDSPNSTSCIMYEKLIDDNEEQVFDATTNSVPTTPPSFTNSLPNLVSASSPPECSTNNNNNNIKQSNDDVMIDPNEFSNPSSSATFGIWPSDFIYEEATDVYWNGLIGGRESNHGQP* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3642 366 Gene3D - 76 123 - -
Aev04g3642 366 MobiDBLite consensus disorder prediction 1 25 - -
Aev04g3642 366 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 14 357 - -
Aev04g3642 366 CDD SANT 76 119 IPR001005 -
Aev04g3642 366 ProSiteProfiles Myb-like domain profile. 69 119 IPR001005 -
Aev04g3642 366 SUPERFAMILY Homeodomain-like 18 115 IPR009057 -
Aev04g3642 366 ProSiteProfiles Myb-like domain profile. 16 68 IPR001005 -
Aev04g3642 366 CDD SANT 23 68 IPR001005 -
Aev04g3642 366 Gene3D - 20 73 - -
Aev04g3642 366 PANTHER MYB TRANSCRIPTION FACTOR 14 357 - -
Aev04g3642 366 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 72 IPR017930 -
Aev04g3642 366 MobiDBLite consensus disorder prediction 295 316 - -
Aev04g3642 366 SMART sant 73 121 IPR001005 -
Aev04g3642 366 SMART sant 20 70 IPR001005 -
Aev04g3642 366 Pfam Myb-like DNA-binding domain 21 68 IPR001005 -
Aev04g3642 366 Pfam Myb-like DNA-binding domain 74 119 IPR001005 -
Aev04g3642 366 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 73 123 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3642 Aev-Chr4 34072602 34074998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3642 2 356 MYB Transcription Factor Family AT5G16770 47.684 1.24e-90 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev04g3642 Myb_DNA-binding 6.3e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3642 K09422 - gmx:547488 314.694