Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3626 ATGGGAATGCGACCCCGGAAATCGGGTGGAGAGGAAGAGGAGGAGGAGGAAGAAGGGGAGGAGCTGCCAGGTTGCGGAGCCACAGTTTCGGGACAATCTGGGTCAGCAAGCAAGAGTCCTGGGCTGGCAACACCACCTGGTGATAACACTTTTCTCAAATTGAACCACCTTGACATACAAAGCGATGAAGGTGGATCGCAGGCAGCAGTTGCTAGCAAGAAGAAAAAGAGAGGGGGTCAAAGGGCTGTTGGAGGTGATAAGAGTGGAAGAGGGCTTCGCCAATTTAGTATGAAAGTGTGTGAGAAGGTTGAAAGCAAGGGAAGAACAACTTACAATGAGGTAGCAGATGAACTTGTAGCTGAATTTGCTGATCCAATCAATGGTGTTTTGACCCCTGATCAGCAACAATATGATGAGAAAAATATTCGTAGAAGGGTCTATGATGCTCTTAACGTTCTCATGGCAATGGATATTATTTCTAAGGATAAAAAGGAAATACAATGGAAGGGTCTTCCTCGTACTAGTCTGAGTGATATTGAAGAACTAAAGGCAGAGCGTGTTGGGCTCAGGAATAGAATTGAAAAGAAAGCAGCATATCTGCAAGAGCTGGAGGAGCAATTGGTAGGTATTCAGAACCTTATACAACGAAATGCGCAATTGTATGGCTCAGAAAACCCTCCAAGTGGCGTATCTTTACCATTTATTTTGGTTCAGACTCGCCCTCATGCAACTGTTGAAGTGGAAATATCAGAAGATATGCAGCTTGTGCATTTTGATTTCAGTAGTACTCCTTTCGAGCTGCATGATGACAACTATGTGCTGAAGGCAATGAAATTTTCCGAGAGACCAGAGAGCGATAATATCGCACACAATCTTATCGATGGAGGTGAAGGTTCTAGCATGTCAGGCTTGTATGAGCCACAAGTTCCTCCTTCAGTTTCAAATATTCCCGTTAGGCCTCCAACATTGCCTCCACTCCCCGGAATATTAAAGGCAAGAGTTAAGAACGAGCATTGA 1017 0.4474 MGMRPRKSGGEEEEEEEEGEELPGCGATVSGQSGSASKSPGLATPPGDNTFLKLNHLDIQSDEGGSQAAVASKKKKRGGQRAVGGDKSGRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFADPINGVLTPDQQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSLSDIEELKAERVGLRNRIEKKAAYLQELEEQLVGIQNLIQRNAQLYGSENPPSGVSLPFILVQTRPHATVEVEISEDMQLVHFDFSSTPFELHDDNYVLKAMKFSERPESDNIAHNLIDGGEGSSMSGLYEPQVPPSVSNIPVRPPTLPPLPGILKARVKNEH* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3626 338 MobiDBLite consensus disorder prediction 28 44 - -
Aev04g3626 338 PANTHER TRANSCRIPTION FACTOR DP 35 338 IPR015648 GO:0005667|GO:0051726
Aev04g3626 338 Gene3D Transcription factor DP 176 297 IPR038168 -
Aev04g3626 338 CDD DP_DD 175 277 IPR014889 -
Aev04g3626 338 Pfam Transcription factor DP 178 288 IPR014889 -
Aev04g3626 338 PIRSF Txn_factor_DP 11 338 IPR015648 GO:0005667|GO:0051726
Aev04g3626 338 PANTHER TRANSCRIPTION FACTOR DP 35 338 - -
Aev04g3626 338 MobiDBLite consensus disorder prediction 1 90 - -
Aev04g3626 338 Gene3D - 83 175 IPR036388 -
Aev04g3626 338 Pfam E2F/DP family winged-helix DNA-binding domain 90 170 IPR003316 GO:0005667|GO:0006355
Aev04g3626 338 SUPERFAMILY "Winged helix" DNA-binding domain 90 171 IPR036390 -
Aev04g3626 338 SMART E2F_TDP_2 87 170 IPR003316 GO:0005667|GO:0006355
Aev04g3626 338 SUPERFAMILY E2F-DP heterodimerization region 177 290 IPR037241 -
Aev04g3626 338 Coils Coil 179 220 - -
Aev04g3626 338 SMART DP_2 177 336 IPR014889 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3626 Aev-Chr4 33995752 33998402 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3626 76 278 E2F-DP Transcription Factor Family AT5G02470 53.659 1.01e-75 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF E2F-DP Aev04g3626 DP 2.1e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3626 K04683 - qsu:112000390 506.908