Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3582 ATGGAGTTTCTGGGCAAAACCGTCAGGAAGGAGGTGAGTGGTGGCGGTTTTATCACCGGAACCGTGAAATCCTACGACCCTTCTTCGGGTTTCCTTGAGATCGTTTATGAGGATGGTGATTCTGAGGAGCTGGAAAAAAACGACGTTGTTCCGATGCTTGAAGGAGCTCAGCCCGAGCTAGCTAAGCCCAAGCCTCGGGTTGGTCGGAAGCCTAAGAAGCGACGCCGTGTGGAGCGGAAGGTCCGGGCCAGAGCGAGTTCAGGTAACGGTAGTGAGAATTTGGTTTCTGAGGTTAGTGAATTTGGGGTAAATTCTGGAGGGAATGCTTCTGCTGGGGATGGGAATTTAGGGTTAGAGAGTAATGGTGAGTTAGGTCTTGGTGTTGGAAATGGGAATGGAGGGAATCTGGCTGTCAATGTGAATGGGAGTGTGGAGTCAATTGGGAGTGATGGAACTGTAGGGAGGGAAATTGGGGTTGATGGGAATTTGAATAAGGCTGCAGTAGCTGTTAACGGGGATTGTGTTAGGGATGGTGGGATTGATTTGAATGCTGGGATTAACTTGAATGAGGATTTGAATTTGAATGACGACTCTGATTTGTTTCCTGTTGAAGGCACTGAGGTTGGTTTGAGGAGAGTTGATTGTATTGACTTGAACCTGGATGTGAATAACGAGGATGATGTGAGCATGAGTGGGGGTGATCTGGGAGGGGAAAAGCTGCAGCGGGAATGTATTTTTGATCTGAATGTGGATGTGTGTGAAGAAGTCAAGGAAGCTCAGGGCGGTGATGCTGATGGGAATGGATGTAACGAGGCAGATGCTTTGGTGGGTAAGATGGGTAGTCTACCCCTAGGGGATGTGGCAAATGTTGACCAGAGGTCTGTGGAAGGTGATGGTGTTCGTAGTGGTTTGAATGAGGCCTGTGATGTTATCGATTTGGAGGTAGATCATGTTTCTGCTAAGTATGAAGCTTCAGATGCTTCTTTATGTTTGATCGAGGGAAAGGAAGGTGACAATAACAGAGGAGATGCAGCAGCTGTTGACGCTCGTCAGGTTTCAGATGCCGTTTCTGCTGAGGCTCAGCAAATGGATACTCCTTCCAAAGCTTGTTTAGATGTAACTCATGAAGTGCAAGATGAGCCAGGAAGTCCATGCAAACAAGGGCGTGGGCAGAGGAAGAGAAGAAAAATTTCAGAAAATCTGAAGACTACCCCAGAGACAGGTTTAAGGAGGAGTTCTCGGGCATCAGCTAGAAAACAGGCTTCAAGAACCACAGGAACACAGGTGATGGATGATGCTATGTTGGTGGAACCCAGTACCTCAGCGGGAGAAAACCCTGTAATCCCTCGTTATGAGCAGCAAGAACAGAAAAATGCCTCTCCGCCGAAGCTGCAATTGCCTCCTTCTTCTCAAAATTTGAATTTAGATGATGTTCTTGTTCTTGATCTCTTCTCTATATATGCTTGTTTAAGATCGTTCAGTACTCTATTATTTCTGAGTCCATTTGAGTTGAAGGATCTCGTAGCTGCACTGAAGTCTGACACCCCCAGCATATTATTTGACAGTATTCATGTTTCCATTTTGGAAACCCTGAGAAAGCACTTAGAATGCCTTTCCAATGAAGGATGCCAATCTGCATCTGATTGCCTGAGGAATCTCAACTGGGATTTTTTGGACCTGCTCACATGGCCCATTTTCATGGCCGAGTACTTTCTGATTCATGATTCAGGATTTAAAGCTGATTTCAATCTTACCCACTCAATGTTCTCAACTGACTACTACAAACAACCTGCAAGTGTGAAGGTTCAGATTCTTCAGCACCTCTGTGATGATATGATTGAAACAGAAGTAGTAAGGTCAGAGCTTAACAGAAGATCGTTGGTAACTGAGAACAACATGGGTTTTGATCAGAGTATGTATGTCGACACTAACAAGAAGAGAAGAGCTGTAACAGATGTGTCTGGTCGCTCTTGCATGACTGAGGAGAATGTTGGTGATGAAACTGACCAGAACAGTGATGATTGCTTCCTTTGCAAGATGGATGGTAAATTAATATGCTGTGATGGGTGCCCCGCTGCATTCCACTACAAGTGTGTCGGAGTTGTAGCTGACAGTCTGCCTGAGGGCGACTGGTTTTGCCCTGAGTGTGCAATTGGTGCACGCTGTCCTTCGATGAAATCACTTCGAGGAGGAGATTTGATAGGGACTGATATTCATGGGCGCCATTATTTTAACACCTGTGGTTACCTGTTAGTGTCCGACTCGTCTGATACAGGGTCCTTGATCAATTTCTACCACAGAAATGATCTACATGCAGTAGTTGATGCCCTAAAGTCTATGGGTACTTTATATCGAGGCATATTAATGGCTATCTGTAAGCACTGGGATATCCCTGCTAACTCAAGTGTGGAGGCTAGTGACGTGGTGGGCTTTAATCAGCGTTCCCGCAAGAGCATGCATATGAAGGGAGGATATTCTGCTGTGCAGACATCCTTAGCACCTGTTACCTCTTCAGAAACATGTTTGGAGAATAATCGGGTGGATCATAAAAGAAAGTTAGAAGAAAATTCTACTACTGACTGCTGTACTCGTCCTGGCCAAGAGTTTCAAAAAGCTCGAAATCGCTTAGATTCAACTACTACTGTAGAAAGTCCTTGTGTTGCTTCAGAAGGATCTGCCAATACCACACAAGTGAGATCAGGCATTGAGAATATTCAAATGAATGGGTTTCATGATTCAAACAGATCTGATGAATCATTGAATCAGTCAGGAGTAGCAGAAAAACACCATCCAGTTGGTGATTCTTCATTGGCATCTTCCAGCTTAGAAGTGGGACGTAAGATGGACATAAGATCTGTGGATGCTAGCTGTTCCCCCTTGACTGATCATAAGACTATTTCAGAAGGGCCTTTTGAAATTGACTACATAAACTATTACAGCTTTGCCCGGACAGCCTCATTAGTTGCAGTTGAGTTGATGTGTAAGCCACCTGAAAAAATAATTAAGAATTTGGCAATGTCTGAAGAAGACATAATTTCAGACCAAGTAAAGGCCATTATGAAGAAATCTACAGACTTTTATTGGCCAAGTATTCAAAACATGAATGCAACTTCCCAAACGGAAAAATGTTGGTGGTGCTTTTCTTGCAAATACGTAAATGAACCCAGGGATTGCTTATTTAATTCTGTGATGAAACCTTTTTGGGAAGTGTCTGAAAATGATTTTGACGGGCTTCAGCTCAGGAAGATCCAGAATGGTCATCTTAGAGATATCATATGTCACATTCTCTCCCTTGAGGTTCGATTACGTGGGCTTTTGTTGGGTCCATGGTTGAATTCACATCAAACTAATCTTTGGCATAACGATCTTATGAAGGCATCTGATCTTCTTCCTGTTAAACGAATATTGCTCCTTTTAGAATCCAATTTGCGACCTTTTGCCCTGTCAGCAGATTGGTTGAAGCATGTGGATTCTATAAATACTATGGGATCAGCTACTCATATTGTGTTGCGTTCACGCACATCTGCAAAACATGGTATTGGTAAGAAGAGGGCTAGGAATTCAGATACTGAACCAATTTCATCTTCAAACACTGCACGTGGGTTGGGAATATATTGGTGGAGAGGTGGTAGGCTTTCCCGGCAATTGTTTAATTGCAAGAGTTTGCCTCGCACTCTGGTTACCAAGGCTGCAAGGCAAGGTGGGTGCTCAAAGATACCTGGCATTTTATATCCTGAGAATTCAGATTATGCAAGACGAAGCAAATATGTTGCCTGGCGAGCTGCTGTTGAGGTGTCAACTAGTGTTGAACAACTGGCTTTACAGGTTAGAGAGTTTTATTCAAACATAAGGTGGCGTGATATAGAGAATAATCATCCTCAATATGTCTTGGACAAGGAATCTAGAAAGTCATTCAGGTTGTTCAAAAAAGCAATTGTACGCAGGAAGTGCACTGAAGGGCAATCTGTGAGGTACCTTATTGATTTTGGGAAGAGAAGGGCTATTCCGGATGTCATTATCAGACATGGTTCTTTGTTGGAAGAATCCTCGAGTGAGAGGAAGAAATACTGGCTGGATGAATCTTATGTTCCCTTGCATCTCTTGAAGAATTTTGAGGAAAAAAGAGTTGTTAGGAAGTCCGACGCAAAGAAACCCGGGAAAATTATTGAGATTGGTAGAGTAAATAACAAGGGCCTGCACCAACGGGGATTTTCATATTTGTTTTCCAGAGTGGAAAAATCTGATTGTTATCAGTGTGGGCATTGCAACAAAGATGTTCCAATCAGGGATGCTGTGAGCTGCATTTATTGCAAAGGATATTTCCATAAGAGGCATGCCAGAAAATTTAGCGGCACCGTATCTGCTGGATTTAATTATTCATGTCATAGATGCCATGGTGGGACTCGTGTAAAGACTAATACCAACAGAAGGAAAGTTGACACAAAACTGCAGAAGGTTCAATCACAGAAATGTAAACCTGTCTCCTCAGATTCTAAATCAGTGAACCCTAAAGGCAATAAAATGGCATTAAGTAAGGTGCGGAAGGTAAGATCTCGAACTAATAAGAAGGTCCCAAGTGTGCCTCTCCGTCGTTCCACCAGGAAGACCAAATCCTTGTATATGCACATACAATTGAATGGAGGGCGCAAAAAGGGAAATCAAGGTAATAAGAAAGTTGGACGTAAAAAAGGGAAGCAAAGTAAATCCAAGAAGGTGAAAGATCAGAAGCCCAAGGAAACTACTGCCCACCTTAAGAAGTTTGCTGCAACTACTGCTAGTAAGAAACGAACGGAGATCTGCAGCAGTTACTGGTGTAACGGTCTTTGGTTGTCCAGAAAGCCAAATGATGAACGCGTAATGCTGTTTAGGGAAAAGAAGCTTGTTATCTTCTCTGAGGATTTTTCTGCTGCCCTTGATCATCCTAAATGCTGCCTTTGCTCTGGAGAAGGACGCACTTTAACTTATATTGCTTGTGAAATCTGTGGAGATTGGTTTCATGGGGATGCTTTTGGGCTCACTGCAGAGAACTCAAGCCAACTTATTGGATTCAAGTGCCATGCCTGTCGTGGTAGAGTTGCTCCGATCTGCCCCCATATGAATAGTGAAGCATTGCCTCTCACTGAATGCAATGCTGCAACCGACTGCGCTGAGGATTTATCAAATCCCGAATCTCTCCAACCTCCTAGTGAGGTTTGA 5196 0.4357 MEFLGKTVRKEVSGGGFITGTVKSYDPSSGFLEIVYEDGDSEELEKNDVVPMLEGAQPELAKPKPRVGRKPKKRRRVERKVRARASSGNGSENLVSEVSEFGVNSGGNASAGDGNLGLESNGELGLGVGNGNGGNLAVNVNGSVESIGSDGTVGREIGVDGNLNKAAVAVNGDCVRDGGIDLNAGINLNEDLNLNDDSDLFPVEGTEVGLRRVDCIDLNLDVNNEDDVSMSGGDLGGEKLQRECIFDLNVDVCEEVKEAQGGDADGNGCNEADALVGKMGSLPLGDVANVDQRSVEGDGVRSGLNEACDVIDLEVDHVSAKYEASDASLCLIEGKEGDNNRGDAAAVDARQVSDAVSAEAQQMDTPSKACLDVTHEVQDEPGSPCKQGRGQRKRRKISENLKTTPETGLRRSSRASARKQASRTTGTQVMDDAMLVEPSTSAGENPVIPRYEQQEQKNASPPKLQLPPSSQNLNLDDVLVLDLFSIYACLRSFSTLLFLSPFELKDLVAALKSDTPSILFDSIHVSILETLRKHLECLSNEGCQSASDCLRNLNWDFLDLLTWPIFMAEYFLIHDSGFKADFNLTHSMFSTDYYKQPASVKVQILQHLCDDMIETEVVRSELNRRSLVTENNMGFDQSMYVDTNKKRRAVTDVSGRSCMTEENVGDETDQNSDDCFLCKMDGKLICCDGCPAAFHYKCVGVVADSLPEGDWFCPECAIGARCPSMKSLRGGDLIGTDIHGRHYFNTCGYLLVSDSSDTGSLINFYHRNDLHAVVDALKSMGTLYRGILMAICKHWDIPANSSVEASDVVGFNQRSRKSMHMKGGYSAVQTSLAPVTSSETCLENNRVDHKRKLEENSTTDCCTRPGQEFQKARNRLDSTTTVESPCVASEGSANTTQVRSGIENIQMNGFHDSNRSDESLNQSGVAEKHHPVGDSSLASSSLEVGRKMDIRSVDASCSPLTDHKTISEGPFEIDYINYYSFARTASLVAVELMCKPPEKIIKNLAMSEEDIISDQVKAIMKKSTDFYWPSIQNMNATSQTEKCWWCFSCKYVNEPRDCLFNSVMKPFWEVSENDFDGLQLRKIQNGHLRDIICHILSLEVRLRGLLLGPWLNSHQTNLWHNDLMKASDLLPVKRILLLLESNLRPFALSADWLKHVDSINTMGSATHIVLRSRTSAKHGIGKKRARNSDTEPISSSNTARGLGIYWWRGGRLSRQLFNCKSLPRTLVTKAARQGGCSKIPGILYPENSDYARRSKYVAWRAAVEVSTSVEQLALQVREFYSNIRWRDIENNHPQYVLDKESRKSFRLFKKAIVRRKCTEGQSVRYLIDFGKRRAIPDVIIRHGSLLEESSSERKKYWLDESYVPLHLLKNFEEKRVVRKSDAKKPGKIIEIGRVNNKGLHQRGFSYLFSRVEKSDCYQCGHCNKDVPIRDAVSCIYCKGYFHKRHARKFSGTVSAGFNYSCHRCHGGTRVKTNTNRRKVDTKLQKVQSQKCKPVSSDSKSVNPKGNKMALSKVRKVRSRTNKKVPSVPLRRSTRKTKSLYMHIQLNGGRKKGNQGNKKVGRKKGKQSKSKKVKDQKPKETTAHLKKFAATTASKKRTEICSSYWCNGLWLSRKPNDERVMLFREKKLVIFSEDFSAALDHPKCCLCSGEGRTLTYIACEICGDWFHGDAFGLTAENSSQLIGFKCHACRGRVAPICPHMNSEALPLTECNAATDCAEDLSNPESLQPPSEV* 1732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3582 1731 MobiDBLite consensus disorder prediction 875 895 - -
Aev04g3582 1731 MobiDBLite consensus disorder prediction 66 81 - -
Aev04g3582 1731 ProSiteProfiles Zinc finger PHD-type profile. 672 719 IPR019787 -
Aev04g3582 1731 MobiDBLite consensus disorder prediction 1554 1571 - -
Aev04g3582 1731 Pfam DDT domain 480 533 IPR018501 -
Aev04g3582 1731 ProSitePatterns Zinc finger PHD-type signature. 675 716 IPR019786 -
Aev04g3582 1731 SUPERFAMILY FYVE/PHD zinc finger 1640 1694 IPR011011 -
Aev04g3582 1731 PANTHER PHD-FINGER AND DNA BINDING DOMAIN-CONTAINING PROTEIN 1 1706 - -
Aev04g3582 1731 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1636 1695 IPR013083 -
Aev04g3582 1731 ProSiteProfiles DDT domain profile. 477 537 IPR018501 -
Aev04g3582 1731 SMART testlast3 477 537 IPR018501 -
Aev04g3582 1731 SMART PHD_3 1642 1689 IPR001965 -
Aev04g3582 1731 SMART PHD_3 1418 1465 IPR001965 -
Aev04g3582 1731 SMART PHD_3 674 717 IPR001965 -
Aev04g3582 1731 SUPERFAMILY FYVE/PHD zinc finger 645 717 IPR011011 -
Aev04g3582 1731 Pfam PHD-finger 675 717 IPR019787 -
Aev04g3582 1731 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 660 739 IPR013083 -
Aev04g3582 1731 MobiDBLite consensus disorder prediction 53 93 - -
Aev04g3582 1731 MobiDBLite consensus disorder prediction 907 921 - -
Aev04g3582 1731 PANTHER PHD FINGER FAMILY PROTEIN 1 1706 - -
Aev04g3582 1731 MobiDBLite consensus disorder prediction 402 429 - -
Aev04g3582 1731 MobiDBLite consensus disorder prediction 907 941 - -
Aev04g3582 1731 MobiDBLite consensus disorder prediction 375 432 - -
Aev04g3582 1731 MobiDBLite consensus disorder prediction 1479 1580 - -
Aev04g3582 1731 CDD PHD2_CHD_II 675 716 - -
Aev04g3582 1731 MobiDBLite consensus disorder prediction 1486 1505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3582 Aev-Chr4 33722237 33744335 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3582 1 1706 PHD Transcription Factor Family AT5G12400 39.816 0.0 1052
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Aev04g3582 DDT 6.1e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3582 - - gmx:100800973 2157.49