Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3575 ATGCTTCAAAGCTTGGTCCCTCGTTCCCCTCTCACTTCAAACCCTAATACTACTACTACTAATAATTCTATGAAGACCAAGCGTTCTGATCGTTTAGACGCCACTGCCGGAGGAGAATCCTCCTCCGCCGCCGCCGATGAGGAGCCTTCCTTCAAACGAGCCAACTTCTCCGGCGAGAAGTCACCGGTGGTTGCGGAAGGCGATGAGGAGCAGCAAGTCTTCGAAGCCGAAGCAGTCGCCGCCGGAGTCGAAGGCGGCGGCGAAGAATCCACCGGTCTCAAGCTTCTAGGCCTGCTCCTCCAATGCGCGGAGTGCGTCGCCATGGACAACCTTGACTTCGCGAACGACCTACTGCCGGAGATCGCGGAGCTCTCATCGCCGTTCGGAACATCGCCGGAGCGCGTCGGCGCGTACTTCGCACAGGCGCTCCAGGCTCGCGTGGTGAGCTCCTGCCTCGGCGCGTACTCACCTCTGACGGCGAAATCAGTGACGCAATCACAGTCTCAGCGAATCTTCAGCGCGTTCCAATCCTACAACTCCGTCTCACCTCTGGTGAAGTTCTCTCACTTCACCGCGAACCAGGCGATCTTCCAAGCAGTCGACGGCGATGATCGCGTGCACATCATCGACCTCGACATCATGCAAGGTCTCCAATGGCCAGGCCTCTTCCACATCCTCGCCTCTAGGTCCAGGAAGATCCGCTCCGTCCGGATCACCGGATTCGGATCTTCCTCCGAACTCCTCGAGTCCACCGGAAGACGACTCGCCGATTTCGCGAGTTCGCTCGGCCTCCCCTTCGAGTTCCACCCGGTGGAAGGGAAAATCGGGAGCGTAACGGATCCGAGTCAACTCGGCGTTCGTCCGAACGAGGCGATTGTGGTGCACTGGATGCACCATTGCCTCTACGACATAACAGGGAGCGATTTAGGGACGTTGAGATTGCTGACTCAGCTCAGGCCTAAGCTGATCACCACCGTTGAGCAGGATCTGAGCCACGCTGGGAGCTTCCTCGCGAGGTTCGTGGAGGCGTTGCATTATTACAGCGCGTTGTTCGACGCGCTCGGGGACGGCTTGGGTGCTGACAGCTTGGAGAGGCACACGGTGGAGCAGCAGCTCTTGGGCTGCGAGATCAGGAACATCGTGGCCGTTGGCGGGCCCAAGAGAACCGGAGAGGTTAAAGTTGAACGGTGGGGAGACGAGTTGAGACGGGTCGGGTTTCGACCCGTTTCTCTCCGGGGCAACCCGGCCGCTCAGGCTAGTTTGCTTCTAGGCATGTTCCCTTGGAGAGGGTATACCCTCGTCGAGGAAAACGGTTCGCTCAAGCTTGGGTGGAAGGACTTGTCCTTGTTGACCGCATCGGCTTGGCAGCCGTCCGATTTGATTACTTATCATGATTGA 1398 0.5844 MLQSLVPRSPLTSNPNTTTTNNSMKTKRSDRLDATAGGESSSAAADEEPSFKRANFSGEKSPVVAEGDEEQQVFEAEAVAAGVEGGGEESTGLKLLGLLLQCAECVAMDNLDFANDLLPEIAELSSPFGTSPERVGAYFAQALQARVVSSCLGAYSPLTAKSVTQSQSQRIFSAFQSYNSVSPLVKFSHFTANQAIFQAVDGDDRVHIIDLDIMQGLQWPGLFHILASRSRKIRSVRITGFGSSSELLESTGRRLADFASSLGLPFEFHPVEGKIGSVTDPSQLGVRPNEAIVVHWMHHCLYDITGSDLGTLRLLTQLRPKLITTVEQDLSHAGSFLARFVEALHYYSALFDALGDGLGADSLERHTVEQQLLGCEIRNIVAVGGPKRTGEVKVERWGDELRRVGFRPVSLRGNPAAQASLLLGMFPWRGYTLVEENGSLKLGWKDLSLLTASAWQPSDLITYHD* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3575 465 MobiDBLite consensus disorder prediction 1 25 - -
Aev04g3575 465 PANTHER SCARECROW-LIKE PROTEIN 23 21 457 - -
Aev04g3575 465 Pfam GRAS domain family 97 456 IPR005202 -
Aev04g3575 465 ProSiteProfiles GRAS family profile. 86 456 IPR005202 -
Aev04g3575 465 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 21 457 IPR005202 -
Aev04g3575 465 MobiDBLite consensus disorder prediction 1 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3575 Aev-Chr4 33678109 33679506 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3575 90 459 GRAS Transcription Factor Family AT5G41920 72.800 0.0 543
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aev04g3575 GRAS 1.4e-115 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3575 - - gmx:100816249 726.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3575 04 33678109 33679506 Aev04g3575 04 33678109 33679506 ECH