Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3570 ATGCCTTTCTTTCTCTGCTTCCTCATCTTCCTCTTTGCTTCTTCTTCTGTCTCTGCTTGTGATCGTTGCCTCCACCAATCCAAGGCTTCCTATTTCTCCAAAGCCTCTGCTCTTTCATCTGGAGCATGTGGATATGGTGATTTGGCCTTAGGCTTAAGTGGTGGACACCTTGCAGCTGCTGTGTCTTCCCTCTTCAAAGATGGAGCAGGTTGTGGTGCTTGTTTTCAGATAAGATGCAAGAACCCAAGTGTGTGCACAAAAGAAGGAACCAGAGTGGTGTTGACTGATCTCAACAAGGATAATCAAACTGACTTTGTCCTCAGCAGCAGAGCCTTTGAGGCCATGGCTCAGAGTGGTAAAGGCCAACAAATTTTGAAGCTTGGAATTGTTGACATTGAATATAAGAGAGTGCCATGTGAATACAAAAATAAGAATCTGGCTGTGCGTGTTGAAGAATCAAGCAAGAAACCAGATTACTTGGCAATTAAGTTTTTGTATCAAGGTGGTCAAACTGAGATAGTAGCCGTTGATGTTGCTGCGGTTGGATCATCAAATTGGAGTTTCATGAGCAGAAACCATGGGGCAGTGTGGGACACAAGCAGGGTGCCACAAGGGGCATTGCAATTCAGAGTTGTGGTGACAGCAGGCTATGATGGCAAATGGATTTGGGCTCAGAAAGTGCTTCCTGCTGATTGGAAAACTGGCCTTCTTTATGATTCTGGCGTCCAGATCACTGACATTGCACAAGAGGGTTGCCCCAAATGCGATGATGGATCATGGCCTTGA 786 0.4567 MPFFLCFLIFLFASSSVSACDRCLHQSKASYFSKASALSSGACGYGDLALGLSGGHLAAAVSSLFKDGAGCGACFQIRCKNPSVCTKEGTRVVLTDLNKDNQTDFVLSSRAFEAMAQSGKGQQILKLGIVDIEYKRVPCEYKNKNLAVRVEESSKKPDYLAIKFLYQGGQTEIVAVDVAAVGSSNWSFMSRNHGAVWDTSRVPQGALQFRVVVTAGYDGKWIWAQKVLPADWKTGLLYDSGVQITDIAQEGCPKCDDGSWP* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3570 261 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 40 144 IPR007112 -
Aev04g3570 261 Pfam Expansin C-terminal domain 147 229 IPR007117 -
Aev04g3570 261 SUPERFAMILY Barwin-like endoglucanases 11 143 IPR036908 -
Aev04g3570 261 Gene3D - 12 140 IPR036908 -
Aev04g3570 261 PRINTS Expansin/Lol pI family signature 127 143 IPR007118 GO:0005576
Aev04g3570 261 PRINTS Expansin/Lol pI family signature 226 240 IPR007118 GO:0005576
Aev04g3570 261 PRINTS Expansin/Lol pI family signature 186 200 IPR007118 GO:0005576
Aev04g3570 261 PRINTS Expansin/Lol pI family signature 61 79 IPR007118 GO:0005576
Aev04g3570 261 PRINTS Expansin/Lol pI family signature 39 57 IPR007118 GO:0005576
Aev04g3570 261 Gene3D - 141 245 IPR036749 -
Aev04g3570 261 PANTHER EXPANSIN-LIKE A1-RELATED 6 257 - -
Aev04g3570 261 SMART dpbb_1 58 134 IPR007112 -
Aev04g3570 261 Pfam Lytic transglycolase 59 134 IPR009009 -
Aev04g3570 261 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 158 240 IPR007117 -
Aev04g3570 261 PANTHER EXPANSIN-B3 6 257 - -
Aev04g3570 261 SUPERFAMILY PHL pollen allergen 144 240 IPR036749 -
Aev04g3570 261 PRINTS Major pollen allergen Lol pI signature 149 164 IPR005795 GO:0005576|GO:0019953
Aev04g3570 261 PRINTS Major pollen allergen Lol pI signature 59 70 IPR005795 GO:0005576|GO:0019953
Aev04g3570 261 PRINTS Major pollen allergen Lol pI signature 165 180 IPR005795 GO:0005576|GO:0019953
Aev04g3570 261 PRINTS Major pollen allergen Lol pI signature 116 131 IPR005795 GO:0005576|GO:0019953
Aev04g3570 261 PRINTS Major pollen allergen Lol pI signature 79 89 IPR005795 GO:0005576|GO:0019953
Aev04g3570 261 PRINTS Major pollen allergen Lol pI signature 216 233 IPR005795 GO:0005576|GO:0019953
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3570 Aev-Chr4 33644217 33645938 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3570 18 260 Expansin Gene Family AT4G38400 68.980 1.32e-116 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3570 - - gmx:100305884 444.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3570 04 33644217 33645938 Aev04g3570 04 33644217 33645938 ECH