Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3561 ATGGACTCCAATAATAACTCCCTGGGAGTGGCAGAACAACTTCCATGTTCTGTTCAGAGTCTTGAGATTCATAAGGGAAGCTGTTTGGTGAACAAGAAATCTTTAAGACCTAAGCTTCTTGCTTCCATTGGAGCACATGAGATTTTCATACCAGAGACATGGAAAGCAGCTTTGACAGAGTTAGTAGCAACTGCATCACTACTGTTCACCCTTACATCCTCCATCATTGCATGCTTGGACTCACATGAGGTTGATCCTAAGCTCCTAGTTCCATTTGCAGTATTCATCATAGCCTTCTTGTTCCTAATAGTCACAGTTCCTCTGTCTGGGGGCCACATGAGCCCTGTTTTCACATTCATAGCAGCATTAAAGGGCGTTATCACTCTCTCTCGTGCACTAATTTATGTCTTAGCACAATGCATTGGCTCAATAATTGGCTTCCTCATACTCAAAAATGTGATGCAGCCTAAATTAGCAGATACATACTCCTTAGGGGGGTGTGCAATTGGTGTAGGAAACTCTGCTATAAAGCCACAAAATGCATTGTTAGTGGAGTTTTCATGCACATTTTTGGTACTATTTGTTGGTGTCACATTGGCATTTGACAAGAAAAGGTCTAAGGAATTAGGGTTACCTATGGTGTGTTTGGTTGTAGCAGGGGCAATGGCATTGGCAGTTTTTGTGTCAATAACTGTAACTGGGCAACCGGGCTATGCTGGTGTGGGCCTGAACCCAGCAAGGTGTTTGGGCCCAGCTTTGCTTAGAGGAGGAGAACTGTGGAATGGGCATTGGGTTTTTTGGGCTGGGCCTTTCTTGGCCTGCATAATATATTATGGTGTGTCTATAAACTTACCAAAGAAGGGTTTGGATTGGGTTGATGGAGAATATGATGTGATGAAATTAGCATTTGCTTCTTGTGGGAGTTTCTCTAGCACTGCTGTTTCAAATGATCTTCAAGTAAGAGCAAGATCAAGGATTCAACTCACACCAACAACAGTTCCTGAAAGATTAATCTGA 1017 0.4277 MDSNNNSLGVAEQLPCSVQSLEIHKGSCLVNKKSLRPKLLASIGAHEIFIPETWKAALTELVATASLLFTLTSSIIACLDSHEVDPKLLVPFAVFIIAFLFLIVTVPLSGGHMSPVFTFIAALKGVITLSRALIYVLAQCIGSIIGFLILKNVMQPKLADTYSLGGCAIGVGNSAIKPQNALLVEFSCTFLVLFVGVTLAFDKKRSKELGLPMVCLVVAGAMALAVFVSITVTGQPGYAGVGLNPARCLGPALLRGGELWNGHWVFWAGPFLACIIYYGVSINLPKKGLDWVDGEYDVMKLAFASCGSFSSTAVSNDLQVRARSRIQLTPTTVPERLI* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3561 338 Pfam Major intrinsic protein 52 275 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aev04g3561 338 PRINTS Major intrinsic protein family signature 94 118 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aev04g3561 338 PRINTS Major intrinsic protein family signature 225 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aev04g3561 338 PRINTS Major intrinsic protein family signature 264 284 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aev04g3561 338 PRINTS Major intrinsic protein family signature 184 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aev04g3561 338 PRINTS Major intrinsic protein family signature 55 74 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aev04g3561 338 PRINTS Major intrinsic protein family signature 131 150 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aev04g3561 338 PANTHER AQUAPORIN-LIKE 24 314 - -
Aev04g3561 338 Gene3D Glycerol uptake facilitator protein. 42 286 IPR023271 -
Aev04g3561 338 SUPERFAMILY Aquaporin-like 46 276 IPR023271 -
Aev04g3561 338 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 24 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3561 Aev-Chr4 33593238 33596881 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3561 54 274 Major Intrinsic Protein MIP AT3G61430 30.000 8.50e-23 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3561 K09866 - gmx:100804160 479.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3561 04 33593238 33596881 Aev04g3561 04 33593238 33596881 ECH