Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3555 ATGACTTCAACGGATTATCTTGTCATTAGAAAAGTTTCAGTCTCTAAGCACCAAAGGTCTGAAGTTGAACCAATGGATTGTACAGTTGCAAGAAAGACTCAAAAGGCTGACCGCGAAAAGTTAAGGAGAGATCGACTTAATGAACAGTTTGTAGAACTTGGCAACATTTTAGATCCTGATAGGCCCAAGAATGACAAAGCAACCATTCTTAGTGATACAGTTCAGTTGCTGAAGGATCTTACTTCTCAAGTTAGTAAACTCAAAGACGAATATGCTGCGCTAAATGAAGAATCTCGAGAGTTGTCTCAGGAGAAAAATGATCTTAGGGAAGAGAAGGCTTCTCTCAAATCAGATATTGAGAACTTGAATAATCAGTATCAGCAGCGACTCAGGACTATGTTTCCATGGACTGCAATGGATCAGTCAGTTATGATGGCTCCGCCATCGTATCCATATCCAATGCCAATGGCAGTCCCTCCCAGTCCGATTCCCATGCAGCCATACCCTTTCTTTGCCAATCAAAATCCTGCAGTCATCCCTAACATGTGTTCAACATTTGGTCCTTATTTAGCCCCCAATACCCTCGTTGAACAGCAATCCACCCAGTATTTATCTCCTCCGTTCCATCCAGGTAGTCGTTCCCATGCATCAGGAAAGCAAGACTCCAGAAACAAATCATCCAAGGAGAGCAAAGCAGAAAAATGTGAGGCGTCAAATGAGGTCACCACAGACCTCGAGTTGAAGACTCCTGGATCCTCTGCAGATCAGGATTTATCATCTGGACAAAGGAAATGCAGCAAGTCATCAAGGAAGGGGAGCAGTTGCACAGAAGGAAGTTCGTTAGGTAGGTGTTCGTCGTCTCATAGCGTTCAAGATAGCTCATCAAGTAGTGTAGGTGGGAGCAGAAAGACTAATGAATGA 921 0.4354 MTSTDYLVIRKVSVSKHQRSEVEPMDCTVARKTQKADREKLRRDRLNEQFVELGNILDPDRPKNDKATILSDTVQLLKDLTSQVSKLKDEYAALNEESRELSQEKNDLREEKASLKSDIENLNNQYQQRLRTMFPWTAMDQSVMMAPPSYPYPMPMAVPPSPIPMQPYPFFANQNPAVIPNMCSTFGPYLAPNTLVEQQSTQYLSPPFHPGSRSHASGKQDSRNKSSKESKAEKCEASNEVTTDLELKTPGSSADQDLSSGQRKCSKSSRKGSSCTEGSSLGRCSSSHSVQDSSSSSVGGSRKTNE* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3555 306 Gene3D - 29 113 IPR036638 GO:0046983
Aev04g3555 306 Coils Coil 29 49 - -
Aev04g3555 306 MobiDBLite consensus disorder prediction 216 241 - -
Aev04g3555 306 MobiDBLite consensus disorder prediction 203 306 - -
Aev04g3555 306 PANTHER TRANSCRIPTION FACTOR BHLH121 11 305 IPR044579 GO:0003700|GO:0055072
Aev04g3555 306 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 30 80 IPR011598 GO:0046983
Aev04g3555 306 CDD bHLH_AtILR3_like 35 109 - -
Aev04g3555 306 PANTHER TRANSCRIPTION FACTOR BHLH121 11 305 - -
Aev04g3555 306 SMART finulus 36 86 IPR011598 GO:0046983
Aev04g3555 306 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 30 99 IPR036638 GO:0046983
Aev04g3555 306 MobiDBLite consensus disorder prediction 242 306 - -
Aev04g3555 306 Coils Coil 70 132 - -
Aev04g3555 306 Pfam Helix-loop-helix DNA-binding domain 31 80 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3555 Aev-Chr4 33569093 33570479 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3555 20 257 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 65.984 1.76e-96 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev04g3555 HLH 2.2e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3555 - - cam:101491902 420.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3555 04 33569093 33570479 Aev04g3555 04 33569093 33570479 ECH
Aev04g3555 04 33569093 33570479 Aev05g0422 05 2908703 2910234 ECH