LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev04g3542	ATGGCCACTACTTTATGGAGCTTACTACTACTCTTTTGCTTCCTCACCACTACCATTGCCTCCTTCGCCGGAAGAGAATATTCCGGTGAAGAGGTGTGGCGGCAGCAGGAGGCGGACAGGGTGAAGGAGTTGCCGGGGCAGCCGGCGGTGAAATTCAGGCACTACTCTGGCTATGTGAAGCTAAGGCCAAATGAAGAGAAGGCATTGTTCTATTGGTTCTTTGAAGCTCAAGAAGAGCCCTCACAAAAGCCTCTTTTGCTTTGGCTTAATGGAGGACCTGGTTGCTCTTCCGTTGCTTATGGAGCTGCACAAGAGCTTGGTCCATTTCTTGTTGAAGACAAAGAACGCCTCAAACTTAACAAATTCTCTTGGAACAGAGTTGCAAATGTGATATTCCTAGAGTCACCGGTTGGGGTTGGATTTTCTTACTCAAATAAGTCAAATGATTTAGAACAAGTTGGAGATAAAGTTACAGCTATTGATAACTATGCCTTCTTGATTGGTTGGTTCAAGAGGTTCCCTTCCTTCACTTCCCATGACTTTTATATTGCTGGAGAAAGCTATGCAGGGCATTATGTTCCACAGCTTGCTGAGGTCATCCATGAAAGAAACAATGATGCCAAAAAGGACTATCACATAAATCTCAAAGGATTCATGGTGGGAAATGCAGTGATTAATGATGCGACAGATGTAAAAGGGTTCATAGATTATGCATGGAGCCACGCCATAATCTCAGACAAAGTGTACGATGACATAACAAAAAATTGTGACTTGAATAGTGCACAAGACCAAACAGAGGCATGCGATGAAAATGTTGGACAGTTATACCAATCTTACCTTGACATTGACATGTATAGCATTTATACTCCCGTTTGCCTCAATCACTACAAAAATATCAATTCATCTCTTTCACCCAAACACCTCGTTGCTCCTCATCTTCTCACAACACATGACCTATGGCATACACTACCATCAGGGTACGATCCCTGTACAGAGGATTATGTTGCCAAATACTTCAATAATAAAGATGTTCAAAATGCCCTTCATGCCAATGTCACCAACTTGCCATATCCCTACACCCTTTGCAGCCGTATAATAAAATGGAACGATTCACCAATCACAGTTCTTCCAATTATTCAGAAGCTCCTAGATGCTGGTTTACGCATTTGGATCTACAGTGGGGACACAGATGGAAGAGTGCCAGTGACATCAACAAGATACAGCATAAAGAAGATGGGTCTGAAGAAAAGGAAAGAGTGGAGAGCATGGTTCAGCCATGGGGATGTGGGAGGGTGGGTGGAAGAGTATGAGCGTGGCCTCACTTTTGCCACCATCAGAGGTGCTGGCCACCAAGTCCCCATCTTCAAGCCACAACACTCCCTTTCTCTCGTCTCCCATTTCCTCCACTCTCAATCATTGCCTACTTCTCGCTTCTAG	1437	0.4419	MATTLWSLLLLFCFLTTTIASFAGREYSGEEVWRQQEADRVKELPGQPAVKFRHYSGYVKLRPNEEKALFYWFFEAQEEPSQKPLLLWLNGGPGCSSVAYGAAQELGPFLVEDKERLKLNKFSWNRVANVIFLESPVGVGFSYSNKSNDLEQVGDKVTAIDNYAFLIGWFKRFPSFTSHDFYIAGESYAGHYVPQLAEVIHERNNDAKKDYHINLKGFMVGNAVINDATDVKGFIDYAWSHAIISDKVYDDITKNCDLNSAQDQTEACDENVGQLYQSYLDIDMYSIYTPVCLNHYKNINSSLSPKHLVAPHLLTTHDLWHTLPSGYDPCTEDYVAKYFNNKDVQNALHANVTNLPYPYTLCSRIIKWNDSPITVLPIIQKLLDAGLRIWIYSGDTDGRVPVTSTRYSIKKMGLKKRKEWRAWFSHGDVGGWVEEYERGLTFATIRGAGHQVPIFKPQHSLSLVSHFLHSQSLPTSRF*	479

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev04g3542	478	Gene3D	alpha/beta hydrolase	35	294	IPR029058	-
	Aev04g3542	478	Pfam	Serine carboxypeptidase	46	469	IPR001563	GO:0004185\|GO:0006508
	Aev04g3542	478	PRINTS	Carboxypeptidase C serine protease (S10) family signature	169	194	IPR001563	GO:0004185\|GO:0006508
	Aev04g3542	478	PRINTS	Carboxypeptidase C serine protease (S10) family signature	440	453	IPR001563	GO:0004185\|GO:0006508
	Aev04g3542	478	PRINTS	Carboxypeptidase C serine protease (S10) family signature	133	143	IPR001563	GO:0004185\|GO:0006508
	Aev04g3542	478	PRINTS	Carboxypeptidase C serine protease (S10) family signature	120	132	IPR001563	GO:0004185\|GO:0006508
	Aev04g3542	478	SUPERFAMILY	alpha/beta-Hydrolases	36	475	IPR029058	-
	Aev04g3542	478	Gene3D	-	375	469	-	-
	Aev04g3542	478	ProSitePatterns	Serine carboxypeptidases, serine active site.	183	190	IPR018202	GO:0004185
	Aev04g3542	478	PANTHER	SERINE CARBOXYPEPTIDASE-LIKE 35	28	471	-	-
	Aev04g3542	478	Gene3D	-	330	367	-	-
	Aev04g3542	478	PANTHER	SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE	28	471	IPR001563	GO:0004185\|GO:0006508
	Aev04g3542	478	ProSitePatterns	Serine carboxypeptidases, histidine active site.	440	457	IPR033124	GO:0004185

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev04g3542	Aev-Chr4	33464027	33469694	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev04g3542	335	473	Calmodulin-binding Proteins	AT2G22960	29.286	5.27e-13	65.9

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev04g3542	K16297		-	gmx:100799746	717.227