Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3533 ATGTATGGTGTGGATGTAAATTCAAATCTTCCAAACAAGGAACGTGAAGATTCCATCAAGGAATTAACTAAGCAGAACAACAACAATGGTGGCAACAACGACGACGACGACAATTGTAACAAGAGCCCTCCTCCTACCAATAAATCCGCAAAAATCAAGGGATGTTTCACCGTTTTGACCGAATCAGATATCAAGAAGCTCCAACTGACAGAAATCAACAACGTATCATCTGTTCTCAATGTGCCAAAATATGAGGCTTCCCTCTTGCTCATTCACTACGGTTGGAGCGCGATCATGGTGCACGAAGCCTGGTTCGATGATGAAGCAAAAGCTCGAGAGTTAACCGGGTTAGTCCACTTTAACAACAACAATAATATCATAAATCCTACTGAGAGCATAACTTGTAAGATTTGTTTCGATACATTTTCATACAAAAAGGTGAAATTTGTGAAATGTGGTCATGTTTTCTGCACCGACCGTTGGAGTTTTTATGTTGACACAAAGATCCAAGACGGTCCTAGTCAGTGCTTGAAGCTGAAATGCCCAGCTTTTTCCTGCAACGCTGCCGTGGACGGCGAAATGATTCGTCGATTCGCGAGCGAATCTAGCCGGATAAAGTACGATCAGTTCGTGCTCCGATCCTTCGTTGAAGGAAGCAAGACCAAGAAGTGGTGTCCAAGTCCAGGTTGTGATTTCGCTGTTGTTTATGAAGCAGATGGTGTGGATCGTAGATTCATAGAAGCTACATGTCTCTGTTACCATAGATTCTGCTGGAAATGTGGTGAAGAAGCTCATACACCAGTGAGTTGTGAAGGTGTTCGAGATTGGGTCGCAAAGAACGAAACAGAGTCGAAGAGCACTCTGTGGATCTTTGATTACACAAAACCTTGCCCTGGCTGTAAACAACCGATTGAGAAGCAAGGAGGTTGCAGTTTTATCACTTGCACCATTTGCAGCTTCCATTTTTGCTGGCTATGCCTTCGCAGCATGCTAGATTGTACCAGATTCGGCCGTTGCACCACCACCTACATCGTCGGCGGAGGTGAGGAAGAGATAATGGTAACATTGCCACCACCAACACCACGATGGGAGGGTGATCATGACAGTTATGAAGAAATCAAGGAATTGGAAGTGATGGAGACTAGGAGAAGGAAAACCAAGATCTACAAGTACACTCACTATTATGAGCGTTGGGCAACCAATGAATTCTCAATGAAGAAAGCAATTGAGATTCTGGTTTCGAGAATCAACAATGCTCGCAACATAAAAACAATGTGTGAGAATTACAAGATCTATAATGAAGATGCATTCGAGTTCTTGCGTTTGGGTTGGGAGAAAATTGTTGAGTGTAGGAGGGTGCTGAAATGGACCTATGCTTATGGATACTTGATATCTCAGCACGAAGAAGCAAAGAAGGAGTTTTTGGAGTATTACCAGAGTGTAGCAGAAAATTCTCTGGAGAAACTCCATCAGTATGCAGAATCAGTTCTGAAAGTGCTTCTTGGTGGTGGGACGAGAAAATATGATTTGAGCAAGATTCGGTGTAAGATGGTGAATTTGACGCATGTGACGAACAGATTCTTCGAGAATATGGTGAAGGCATTGGAGGAGAACAAGCTGGAAGAAGTGAAAGTGAAGAAATATGCAGGGATGAAACATGAGATTGATAATGATGATAATGAAAGGTGGAAATGCCCAAACTGTGGGGAATTCATGGATTCAACCTCCGAAAAGTGTCCCTGTCGTCGCTCTTCCAACAAGAAACCACTACTCACCATGGAGATCTTGACTTTATTCGAATAA 1803 0.4298 MYGVDVNSNLPNKEREDSIKELTKQNNNNGGNNDDDDNCNKSPPPTNKSAKIKGCFTVLTESDIKKLQLTEINNVSSVLNVPKYEASLLLIHYGWSAIMVHEAWFDDEAKARELTGLVHFNNNNNIINPTESITCKICFDTFSYKKVKFVKCGHVFCTDRWSFYVDTKIQDGPSQCLKLKCPAFSCNAAVDGEMIRRFASESSRIKYDQFVLRSFVEGSKTKKWCPSPGCDFAVVYEADGVDRRFIEATCLCYHRFCWKCGEEAHTPVSCEGVRDWVAKNETESKSTLWIFDYTKPCPGCKQPIEKQGGCSFITCTICSFHFCWLCLRSMLDCTRFGRCTTTYIVGGGEEEIMVTLPPPTPRWEGDHDSYEEIKELEVMETRRRKTKIYKYTHYYERWATNEFSMKKAIEILVSRINNARNIKTMCENYKIYNEDAFEFLRLGWEKIVECRRVLKWTYAYGYLISQHEEAKKEFLEYYQSVAENSLEKLHQYAESVLKVLLGGGTRKYDLSKIRCKMVNLTHVTNRFFENMVKALEENKLEEVKVKKYAGMKHEIDNDDNERWKCPNCGEFMDSTSEKCPCRRSSNKKPLLTMEILTLFE* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3533 600 Pfam IBR domain, a half RING-finger domain 206 270 IPR002867 -
Aev04g3533 600 Pfam IBR domain, a half RING-finger domain 294 329 IPR002867 -
Aev04g3533 600 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 24 548 IPR031127 GO:0004842|GO:0016567
Aev04g3533 600 MobiDBLite consensus disorder prediction 1 48 - -
Aev04g3533 600 SUPERFAMILY RING/U-box 282 340 - -
Aev04g3533 600 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ARI5-RELATED 24 548 - -
Aev04g3533 600 Gene3D - 266 543 - -
Aev04g3533 600 SUPERFAMILY RING/U-box 130 214 - -
Aev04g3533 600 Pfam Ariadne domain 380 545 IPR045840 -
Aev04g3533 600 MobiDBLite consensus disorder prediction 23 47 - -
Aev04g3533 600 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 129 219 IPR013083 -
Aev04g3533 600 SMART ibrneu5 205 270 IPR002867 -
Aev04g3533 600 SMART ibrneu5 278 333 IPR002867 -
Aev04g3533 600 ProSiteProfiles TRIAD supradomain profile. 131 343 IPR044066 -
Aev04g3533 600 SUPERFAMILY RING/U-box 206 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3533 Aev-Chr4 33417872 33419674 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3533 69 543 C3H Transcription Factor Family AT2G31510 41.336 1.06e-122 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3533 K11968 - gmx:100810427 399.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3533 04 33417872 33419674 Aev04g3533 04 33417872 33419674 ECH