Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3528 ATGGGCAAGTCCAGCAAGAAATCAGCAACCAAAGTTGATGCCGCTCCAGCTGTTGCGACTTTGAAGTCTGCCAAGAAGGGCAAGAGGCAGGCTGATGAGGAACTGGAGAAGCAAGTCAGTGCTAAGAAGCAGAAGATAGAAGAAGTTGCCCAGAAGCAAAAGAAAGAAGTTAAGGTCCAAAAGAAGAAGGAAGAAAGTAGTTCAGATGATTCTTCAGAATCTGAAGATGAGAAACCTGCATCAAAAGTTGCTTCAGCAAAGCAACCTGCTAAGAATGGTGCTTTGGCAAAGAAAGCCAAACCTGCTAGCAGTTCTAGTTCAGATGATTCTTCTTCAGAATCAGAAGATGAGAAACCTGCAGCTAAAGCTGTTGCTCCTTCAAAAAGTCTGCCTGCCAAGAATGGCACTCTAGCAAATAAAGGCAAGCCAGCTGCCAGCTCCACTTCGTCTGAATCCTCTGATGAGGATGAGGCGCCAAAATCAAAGGTTACTGCTGCAGCCAAAAATGTACCTCTTGCTGCAAAGAAGAACACTCAGCCCAGTGAAAGCTCTGACAGTGATAGTGATGAGTCTGATGACAGCAGCTCTGATGATGACAATGTGTCCAAGAAGTTGCCTGCTAAGAATGCCCCTGCTAAGAATGTGCCTGCCAAGAAGGTTGAATCCGACTCAAGCTCTGATAGTAGTTCAGATGAAGATGAGAAAAAACCAGTTGCCAAAAAGTTGCCTACTCCTGCTGCTGCTCCAAGTAAGAAGGTTCAGACCAGTGAAAGCTCAGATGAGTCAAGTGAAAGTTCTGATGAAGATAATGATACAAAACCTGCTGCAAAAGTTGTGGCAAAGCCTCCTGTTGCAAAGAAGAATGATGACAGTTCAGATTCTGATGATAGCAGCTCTGAGGCAGATGATAAACCTGCTGCCAAGACTGTTCCAAGTGCCAAGTCAGCACCTGCAGCTAAGCCAATGAAGAAGGCTAGTAGTTCTGATGAGAGTGAATCAGATGATGACTCTTCTGACAGCGACTCTGAGGATGAAAAGAAAACTGCTAAAGTTTCAAATGGTACCAAAAAGCCAGCACCTGTTGTGAAGACAGCTAACAAGAAGTCAAGTGGAACTTCCTCAGAAAGTGATTCTTCAGATGATGAGGGGAAAATGGATGTTGATGAGGAAGATAGTTCTGATGATAGTGAGGAAGAGACCCAGAAGAAAAAGCCTGTTAAAGCTTCAAAAGATAGCAGTGACGATTCTGAGAGTTCAGATGAAAGTGAGGAAGATGAGAAGCCCTCCAAGACTCCTCAGAAAACTGCAAAGGATGTGGAGATGGTTGATGCTGACTCAGCTGGAAAGAAAGCTCCTAAAACCCCAGCTACACCGAAAGGAGAAAATGCTGGATCTAAAACACTGTTTGTTGGAAACTTGTCATTTAGTGTCGAACGTGAAGATGTGGAAAATTTCTTCAAAGATTGTGGAGAAGTTGTTGATGTCCGTTTTGCCAGTGATGATACTGGGAGGTTTAAAGGCTTTGGGCATGTTGAATTTGCTACGGCAGAGGAAGCCAAAAAGGCCCTTGAGTTGAATGGGCATGACCTGTTGAATCGTGCTGTTCGCCTTGATTTAGCTCGTGAAAGGGGCTCATATACCCCGGGTGGAGGTGAAAGCAATTCATTCCAGAAAAGTGGAAGAGGTGGCCAGTCTTTTACAGTATTTGTGAAGGGCTTTGACAAGTCCCTTGAAGAAGAGGAGCTAAAATCTAGCCTGAGGGAGCATTTCAGTTCTTGTGGTACGATTTCAAGAATATCAGTTCCAAAAGATTATGATTCTGGTGCTGTTAAAGGGTTTGCTTACATGGACTTCAGTGATTCTGATAGCTTGAACAAAGCGCTAGAACTCCATGAATCTGAACTTGGTGGCTATTACCTTTCTGTGGATGAAGCCAAACCAAGAGATAATCAAGCATCAGGTGGTAGAGGTGGTGGTAGAAGTGGTGGTGATCGATTCGGTGGAAGGAGTGGTGGTGATCGATTCGGTGGAAGGAGTGGTGGCGATCGTTTTGGTGGAAGGGGTGGTCGTGGTGGATTTGGAGGAAGAGGTGGTGGCGGCGGTAGAGGTGGTCGAGGAAGAGGTGGTGGAAGGGGTAACAAGCCAAACCTTGCTGCAGAAGGAACAGGAAAGAAGACCACATTCGCTGACGATGATTAG 2199 0.4529 MGKSSKKSATKVDAAPAVATLKSAKKGKRQADEELEKQVSAKKQKIEEVAQKQKKEVKVQKKKEESSSDDSSESEDEKPASKVASAKQPAKNGALAKKAKPASSSSSDDSSSESEDEKPAAKAVAPSKSLPAKNGTLANKGKPAASSTSSESSDEDEAPKSKVTAAAKNVPLAAKKNTQPSESSDSDSDESDDSSSDDDNVSKKLPAKNAPAKNVPAKKVESDSSSDSSSDEDEKKPVAKKLPTPAAAPSKKVQTSESSDESSESSDEDNDTKPAAKVVAKPPVAKKNDDSSDSDDSSSEADDKPAAKTVPSAKSAPAAKPMKKASSSDESESDDDSSDSDSEDEKKTAKVSNGTKKPAPVVKTANKKSSGTSSESDSSDDEGKMDVDEEDSSDDSEEETQKKKPVKASKDSSDDSESSDESEEDEKPSKTPQKTAKDVEMVDADSAGKKAPKTPATPKGENAGSKTLFVGNLSFSVEREDVENFFKDCGEVVDVRFASDDTGRFKGFGHVEFATAEEAKKALELNGHDLLNRAVRLDLARERGSYTPGGGESNSFQKSGRGGQSFTVFVKGFDKSLEEEELKSSLREHFSSCGTISRISVPKDYDSGAVKGFAYMDFSDSDSLNKALELHESELGGYYLSVDEAKPRDNQASGGRGGGRSGGDRFGGRSGGDRFGGRSGGDRFGGRGGRGGFGGRGGGGGRGGRGRGGGRGNKPNLAAEGTGKKTTFADDD* 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3528 732 MobiDBLite consensus disorder prediction 397 415 - -
Aev04g3528 732 MobiDBLite consensus disorder prediction 641 732 - -
Aev04g3528 732 SMART rrm1_1 467 538 IPR000504 GO:0003723
Aev04g3528 732 SMART rrm1_1 567 643 IPR000504 GO:0003723
Aev04g3528 732 MobiDBLite consensus disorder prediction 423 447 - -
Aev04g3528 732 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 566 647 IPR000504 GO:0003723
Aev04g3528 732 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 568 640 IPR000504 GO:0003723
Aev04g3528 732 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 468 535 IPR000504 GO:0003723
Aev04g3528 732 Gene3D - 374 548 IPR012677 -
Aev04g3528 732 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 423 655 - -
Aev04g3528 732 Coils Coil 28 63 - -
Aev04g3528 732 MobiDBLite consensus disorder prediction 1 466 - -
Aev04g3528 732 Gene3D - 557 683 IPR012677 -
Aev04g3528 732 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 466 542 IPR000504 GO:0003723
Aev04g3528 732 CDD RRM2_NUCLs 567 645 IPR034350 -
Aev04g3528 732 MobiDBLite consensus disorder prediction 25 82 - -
Aev04g3528 732 MobiDBLite consensus disorder prediction 381 396 - -
Aev04g3528 732 PANTHER BNAA08G02930D PROTEIN 423 655 - -
Aev04g3528 732 SUPERFAMILY RNA-binding domain, RBD 561 677 IPR035979 GO:0003676
Aev04g3528 732 MobiDBLite consensus disorder prediction 224 240 - -
Aev04g3528 732 CDD RRM1_NUCLs 467 543 IPR034349 -
Aev04g3528 732 MobiDBLite consensus disorder prediction 283 303 - -
Aev04g3528 732 SUPERFAMILY RNA-binding domain, RBD 457 564 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3528 Aev-Chr4 33380931 33386071 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3528 455 629 Eukaryotic Initiation Factors Gene Family AT4G34110 31.111 3.06e-13 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3528 K11294 - gmx:100786132 478.404