Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3527 ATGGCTGCATCAGTTCCATTTCCTTCAAATCTTTTACCAAGTGATGCAAGTCCTGAATGGATGAACAAAGCAGATAATGCATGGCAACTAGTAGCAGCAACACTTGTGGGCCTACAAAGTGTTCCTGGGCTCATAATATTATATGGTGGAGCTGTTAAGAAAAAATGGGCTGTGAACTCTGCTTTCATGTCCCTCTATGCTTTTGCATGTGTCTTTTTCTGTTGGGTTGTTTGGGGTTATAGGATGTCTTTTGGTGATGGGTTATTACCATTTTGGGGCAAACCTGGTGTTGCATTGGGTGAGAAATATCTTTTTCTTAAGGCATTTTCTGGGGCATTCCCTAATGCTACTATGGTGTATTTTCAGTGTGTTTTTGCAGCAATCACTTTGATTTTGATTGCTGGGGCTTTGTTGGGAAGAATGAACTTCTATGCTTGGATGTTGTTTGTGCCTTTGTGGCTCACTTTTTCATATACTTTCACTGCATTTAGCATTTGGAGTCCAAATGGGTTTCTCTTCAAATTAGGTATAATTGATTACTCTGGTGGATATGTCATCCATTTGTCTTCTGGGGTTGCTGGATTCACTGCAGCTTATTGGGTTGGACCTAGGCTTAATAAGGACAGGGAAAGATTCCCTCCAAACAACATCCTACTAATGCTAGCAGGGGCAGGTTTACTGTGGATGGGGTGGACAGGGTTCAACGGTGGAGACCCTTACACAGTCAGCAATGATGCATCATTGGCAGTGCTCAACACTCATGCTTGCACTGCAACCAGCTTGCTCACTTGGGTCATCCTTGATGTCATCTTCTTCAGGAAGCCCTCTGTCATTGGTGCTGTTCAAGGCATGATCACTGGCTTGGTCTGCATCACCCCTGCTGCAGGTGTTGTGCAAGGATGGGCAGCACTTATAATGGGGATGTTATCAGGCTCAATTCCTTGGTTCACCATGATGGTGATCCACAAGAGATCAAAGCTTCTCCAAAAAGTAGATGATACAATGGCAGTATTACACACTCATGCCATTGCAGGAAGCCTTGGAGGGATCCTAACAGGGCTATTTGCTAAGCCAAACCTTAACTACTTGTTCTTTGGTACATATTCCAAATATGTTGGCTTTTTCTATGGCCTCCAAATGAAGCTGTTCCATTATGGGTTCAGGCAAATTCTGATTCAGTTACTTGGGATCTTGTTTGTTGTATCACTCAATGTTGTTAGCACAAGCTTGATTTGCATCTTGATTAGGTATTTCATTCCATTAAGAATGTCTGAAGAGGATATGGAGATTGGTGATGAAGCTGCTCATGGTGAAGAAGCTTATGCAATTTGGGGTCAAGGTGATAAGCTTGAGAATTCAAGTTCTAAGTATGGAAGTTCTTTGTATGATGATGTTGAAACTGCTGCTACTACTAAGAAAAAACATGTTGGTCACGTTGAGATGATGTAG 1449 0.4231 MAASVPFPSNLLPSDASPEWMNKADNAWQLVAATLVGLQSVPGLIILYGGAVKKKWAVNSAFMSLYAFACVFFCWVVWGYRMSFGDGLLPFWGKPGVALGEKYLFLKAFSGAFPNATMVYFQCVFAAITLILIAGALLGRMNFYAWMLFVPLWLTFSYTFTAFSIWSPNGFLFKLGIIDYSGGYVIHLSSGVAGFTAAYWVGPRLNKDRERFPPNNILLMLAGAGLLWMGWTGFNGGDPYTVSNDASLAVLNTHACTATSLLTWVILDVIFFRKPSVIGAVQGMITGLVCITPAAGVVQGWAALIMGMLSGSIPWFTMMVIHKRSKLLQKVDDTMAVLHTHAIAGSLGGILTGLFAKPNLNYLFFGTYSKYVGFFYGLQMKLFHYGFRQILIQLLGILFVVSLNVVSTSLICILIRYFIPLRMSEEDMEIGDEAAHGEEAYAIWGQGDKLENSSSKYGSSLYDDVETAATTKKKHVGHVEMM* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3527 482 PANTHER AMMONIUM TRANSPORTER MEP2 2 482 IPR001905 GO:0008519|GO:0016020|GO:0072488
Aev04g3527 482 Gene3D Ammonium transporter AmtB like domains 11 445 IPR029020 -
Aev04g3527 482 PRINTS Rhesus blood group protein signature 122 138 IPR002229 GO:0005887
Aev04g3527 482 PRINTS Rhesus blood group protein signature 218 236 IPR002229 GO:0005887
Aev04g3527 482 PRINTS Rhesus blood group protein signature 249 271 IPR002229 GO:0005887
Aev04g3527 482 PANTHER AMMONIUM TRANSPORTER 2 482 - -
Aev04g3527 482 ProSitePatterns Ammonium transporters signature. 179 204 IPR018047 GO:0008519|GO:0016020|GO:0072488
Aev04g3527 482 TIGRFAM amt: ammonium transporter 25 441 IPR001905 GO:0008519|GO:0016020|GO:0072488
Aev04g3527 482 Pfam Ammonium Transporter Family 27 441 IPR024041 GO:0008519|GO:0016020|GO:0072488
Aev04g3527 482 SUPERFAMILY Ammonium transporter 20 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3527 Aev-Chr4 33376355 33378732 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3527 116 468 Inorganic Solute Cotransporters AT2G38290 62.606 1.64e-145 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3527 K03320 - gmx:100787856 838.95