Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3520 ATGAAGATGGAGGAGTACAAGGAGGGGCGCGTGAAGAAGGCGAGGTTGCAATCGATGCTGAAAACGTTGCTGGATGATCCTATGCTTGCCGATGTACCCAACAATCCAACGTTGGAAGATGTCGATACTCTTCTCAGCCTTGAGCATGGTAGTGCCATGCGAGTTTCTGTCTTCAAATTGGATTCAACTTCTTTCGAGGTGGCGGTGATGAATTCTGCGACGGTGAAGGATTTGAAGGTTGCCATCAAGAAGAAAGTGAATGACATGGAACAATCTAGTTTGGGTCACCGCCATATTTCTTGGAGGCATGTATGGGCAAACTATTGCTTGGCGTACCATAACAACAAGCTCCTAAATGATGATGATGCACTTCACAGTTTTGGTATACGAAATAATTCTCAGGATGCTACAAAGATGCGTGTGCTGGCATGTACAGATGAAGCAGTTCTATCTGTCAGTCAAGTCTTTGAAGCAATGAGAGAACTTGGGAATGAAGGGGTTGAGCAGTATGATCCTCTGGTTCTTACATCTGCATCATCACTAAGCAAGCTTCTAGTGGAATCTTCCTCTGTGGATACTGTCATTTTAATTTGGCAGTCTCTTGATTGTCCTACGAACCAACTGGTTCAAGAAGTCTTGAGAGTGTTAAAAGTTGGTGGAACAACCCTTGTTCTCAAGTCATCTCAGTCTGCTGCAAGTTCGCTTGAAAAGTTTATATCTGATCTAGAGAGCAGGTTATTGGTGGCAGGTTTTTCAGAAACACAAGTTTTATCTTCTGGGATCAAAGCTAAAAAGCCTTCTTGGAAAGTTGGATCGTCTTTTGCATTGAAGAAAGTGGTGAAGAGTTCACCTAAAGTGCAAATTGATGTTGATTCAGATCTGATTGATGAAGATAGTCTTTTGACTGAAGAAGATTTGAAGAAGCCCCAGCTCCCACCTGGTAAAGAGTACTTTTATATTTTCTGTCCGCATTTGATTAGTATTCTCTACGATATAGGGCTCTTAACCAAAATACCAAATGCTTGTGCAATGAGTGACTGTGAGATAGGAAGTACAAGAAAAGCCTGCAAAAATTGCACATGTGGGAGAGCTGAAGAAGAGGAAAAAGTGAAATTAGGATTGACTGCAGAACAGATTAATAATCCTCAATCAGCTTGTGGCAGTTGTGGTCTAGGGGATGCTTTCAGGTGCGGTACATGCCCTTACAAGGGTCTTCCTCCCTTCAAGTTAGGCGAGAAGGTTACACTGTCTGGAATCGTGCTTCTTCCTTCATCGCCTTCCTCCATCGAGACGCGCCTCGCGGCCGCCGCAGAAGCTCCGCCGATGCCAAACGTCCTTCTTCGCCTTGAGCCGCCGCGAAAGGAAACCCATTATGATGTCCTTGACGTCAAGGAAGATGCGAGTTACGAAGAAATTCGTGCTAGCTACCGTTCCGCCGTGCTCAGTTTACATCCTGATAAGCTATTGAAGACTGATGATGCATCCAACATCAATCAAACAAGTGGAGACAGATTTCTCAAAGTACAAAAGGCATGGGAAGTTCTCAGCAATTCAAGCTCGCGTTTATTTTACGATAATGAGCTCAAAAGTTCAAGGCACAATGTCTCAGCTGTTGAAATTGCCGAAGTTGCAGAAGATTTGAGCTTGCAAGATATGATAATTGAAGATGATGGAGAAGCATTGGAACTATTATATCAGTGCAGATGTGGTGATTACTTCTCTGTAGACTCATTGGAATTGCAGGAAATGGGGTATTCCCTGTTGAGGGATGGAAGTAGGATGTCCATATTGAACAATGATTCTTTGCCAGGATCAGTGATTCTTCCCTGTGGATCTTGTTCACTAAAAGCTCGTCTTGTAATCACTATGGATCATAATTGA 1881 0.4333 MKMEEYKEGRVKKARLQSMLKTLLDDPMLADVPNNPTLEDVDTLLSLEHGSAMRVSVFKLDSTSFEVAVMNSATVKDLKVAIKKKVNDMEQSSLGHRHISWRHVWANYCLAYHNNKLLNDDDALHSFGIRNNSQDATKMRVLACTDEAVLSVSQVFEAMRELGNEGVEQYDPLVLTSASSLSKLLVESSSVDTVILIWQSLDCPTNQLVQEVLRVLKVGGTTLVLKSSQSAASSLEKFISDLESRLLVAGFSETQVLSSGIKAKKPSWKVGSSFALKKVVKSSPKVQIDVDSDLIDEDSLLTEEDLKKPQLPPGKEYFYIFCPHLISILYDIGLLTKIPNACAMSDCEIGSTRKACKNCTCGRAEEEEKVKLGLTAEQINNPQSACGSCGLGDAFRCGTCPYKGLPPFKLGEKVTLSGIVLLPSSPSSIETRLAAAAEAPPMPNVLLRLEPPRKETHYDVLDVKEDASYEEIRASYRSAVLSLHPDKLLKTDDASNINQTSGDRFLKVQKAWEVLSNSSSRLFYDNELKSSRHNVSAVEIAEVAEDLSLQDMIIEDDGEALELLYQCRCGDYFSVDSLELQEMGYSLLRDGSRMSILNNDSLPGSVILPCGSCSLKARLVITMDHN* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3520 626 PANTHER ANAMORSIN HOMOLOG 140 313 - -
Aev04g3520 626 PANTHER ANAMORSIN 140 313 IPR007785 GO:0005737|GO:0016226|GO:0051536
Aev04g3520 626 SMART dnaj_3 455 520 IPR001623 -
Aev04g3520 626 Hamap Fe-S cluster assembly protein <gene_name> [DRE2]. 136 429 IPR007785 GO:0005737|GO:0016226|GO:0051536
Aev04g3520 626 Gene3D DPH Zinc finger 536 626 IPR036671 -
Aev04g3520 626 Gene3D Vaccinia Virus protein VP39 139 275 IPR029063 -
Aev04g3520 626 ProSiteProfiles DPH-type metal-binding (MB) domain profile. 543 622 IPR007872 -
Aev04g3520 626 SUPERFAMILY Chaperone J-domain 449 528 IPR036869 -
Aev04g3520 626 Pfam Ubiquitin-like domain 53 134 IPR040610 -
Aev04g3520 626 PANTHER ANAMORSIN 337 419 IPR007785 GO:0005737|GO:0016226|GO:0051536
Aev04g3520 626 SUPERFAMILY Ubiquitin-like 48 133 IPR029071 -
Aev04g3520 626 PRINTS DnaJ domain signature 458 476 IPR001623 -
Aev04g3520 626 PRINTS DnaJ domain signature 500 520 IPR001623 -
Aev04g3520 626 PRINTS DnaJ domain signature 476 491 IPR001623 -
Aev04g3520 626 SUPERFAMILY CSL zinc finger 544 623 IPR036671 -
Aev04g3520 626 Gene3D - 47 138 - -
Aev04g3520 626 ProSiteProfiles dnaJ domain profile. 456 528 IPR001623 -
Aev04g3520 626 Pfam Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis 344 416 IPR046408 -
Aev04g3520 626 Gene3D DnaJ domain 445 534 IPR036869 -
Aev04g3520 626 PANTHER ANAMORSIN HOMOLOG 337 419 - -
Aev04g3520 626 Pfam DnaJ domain 456 525 IPR001623 -
Aev04g3520 626 CDD Ubl_SNRNP25 52 134 IPR040610 -
Aev04g3520 626 CDD DnaJ 456 517 IPR001623 -
Aev04g3520 626 Pfam CSL zinc finger 546 620 IPR007872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3520 Aev-Chr4 33304953 33311761 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3520 454 525 C2H2 Transcription Factor Family AT1G74250 41.667 1.59e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3520 K22746 - gmx:100802432 386.341