Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3512 ATGAGCTCTCGCTCCAGCAGGGGGCCAACTATCAGAAGTTATCGGCGTAGGAAAGCAGTTTTGGACTTTGACCTTAACCGTGAACCAGGTGGTGAGAATCGGGAGCAGGAAGGGCCTTCAACACAGGTTGCACCTCAACAAGAAGTTCAAGCTGACCAACAACATCAGGTTGTGCAGATGCCGCAGGTGGTCCAACCTCCAACCATTGATGTGGAGGCCATTGATGATGATGTTATTGAATCTAGCCCGAGGGCTTTTGCTGAGGCTAAAAACAATGCAAGAAGAAATCGTGTCAGGACTGTAGTTGATGTGGATTTGGAAGATCAGGCTAGTGTAGCCAACAATAATGGCAACAAACGAAAAAGAGATACATCAAGCCGAAAAATTATAAATTGTGATTTTTACATCAACTTGGAAGGCAGTAGCAGTTCTACGAAGGAAACTGTTCCAAAGCCACCTGAACCTCCAAAGGAGCCTGTCTTCAACTGTCCAATATGCATGGGCCCTTTGGCTGAAGAAATGTCGACAAGGTGTGGTCATATCTTTTGCAAGAGTTGCATCAAGGCTGCAATAAGTGCTCAGGGGTCTGCATACAAGCTGTGTGAGGATGGGGATTGGAAGAAACATCGCTGCAGTTCAGATATTACTGAGTGGCTGTGTTGTTTCTGGCATGGGTTCCCCAAGGCAGAAACTTAA 696 0.4641 MSSRSSRGPTIRSYRRRKAVLDFDLNREPGGENREQEGPSTQVAPQQEVQADQQHQVVQMPQVVQPPTIDVEAIDDDVIESSPRAFAEAKNNARRNRVRTVVDVDLEDQASVANNNGNKRKRDTSSRKIINCDFYINLEGSSSSTKETVPKPPEPPKEPVFNCPICMGPLAEEMSTRCGHIFCKSCIKAAISAQGSAYKLCEDGDWKKHRCSSDITEWLCCFWHGFPKAET* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3512 231 ProSiteProfiles Zinc finger RING-type profile. 163 201 IPR001841 -
Aev04g3512 231 MobiDBLite consensus disorder prediction 15 34 - -
Aev04g3512 231 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 156 218 IPR013083 -
Aev04g3512 231 MobiDBLite consensus disorder prediction 35 55 - -
Aev04g3512 231 PANTHER ELFLESS, ISOFORM B 12 197 - -
Aev04g3512 231 SUPERFAMILY RING/U-box 162 196 - -
Aev04g3512 231 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF4-LIKE 12 197 - -
Aev04g3512 231 Pfam Zinc finger, C3HC4 type (RING finger) 162 193 - -
Aev04g3512 231 MobiDBLite consensus disorder prediction 1 55 - -
Aev04g3512 231 ProSitePatterns Zinc finger RING-type signature. 178 187 IPR017907 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3512 12 195 C3H Transcription Factor Family AT5G48655 47.312 8.25e-34 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3512 K22651 - gmx:100792853 215.698