Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3505 ATGGCAGCGGCTTTCGTCAAGCTCGATGATTCTCCAATGTTCCAGAAGCAGTTATTTTCTCTTGAAGAAACAGCTGATGAGTTAAAGGATCGGTGCCAGAAACTATTCAAAGGATGCAAGAAGTTTATGACAGCTTTGGGGGAAGCTTATAATGGAGAAGTTGCATTTGCTGATTCATTAGAAATCTTTGGTGGTGGCCAGGATGATCCTGTCAGTGTATCAATTGGAGGACCGGTCATATCTAAGTTTATCAGCACACTGCGTGAGCTTGCTACTTTCAAGGAGCTTCTTCGATCACAGGTAGAACATGTGTTGATTGACCGGTTGATGGAGTTTATGAATGTTGATTTGCAAGAGGCAAAGGATTCCCGCAAGCGTTTTGACAAGGCTGTGCAATCTTATGATCAGTCACGAGAAAAGTTTGTATCCTTGAAGAAGAATACGCCAGGAGACGTTGTTGCTGAATTAGAAGAGGATCTACAAAATTCAAAGTCAGCATTTGAAAAAAGTCGCTTCAATCTAGTAAACACTCTCATGAATGTTGAAGTGAAAAAGAAATACGAGTTCTTGGAGTCGATTAGTGCAATAATGGATGCTCATCTGAGATACTTTAAGCTGGGCTATGACTTACTTAGCCAAATGGAGCCCTATATTCATCAGGTGCTAACATATGCACAACAATCTAAAGAAATGGCTAATATTGAGCAAGACAAGCTTGCAAAAAGGATCCAGGAATATCGAACACAGGCTGAGATGGAAAATATACGAGCTTCTAGCAATACAGAACCCGTGCTAAGTACTGATGGTACACATATTGTTGGTTTGAACTCTTACAAAAACTTCGAAGGAGCGATGCCGCCTGCAGCCAAAGGGGAGGTTCAAACAGCTAAACAGGGCTATCTGTTAAAGCGTTCATCACACTCGCGAGGAGATTGGAAACGAAGGTTCTTTGTACTTGACAACCAAGGGAATTTATTTTATTACAGATCGAAGGGAGCCAAACCCACGGGCTCTCAGTCATCTAATTATTCTCGTCCTTCTGAACAAAATAGTGGCATGTTTGGTAGATTTCGCTCAAGGCACAGCAGGGCATCCTCGCTAAATGAGGATGTTTTGGGTTGTTGTACAATTGATCTGTGCACATCTACTATAAAGATGGATGCAGAGGACACAGATCTACGTCTATGCTTCCGTATAATTTCCCCCTCAAAGACATATACACTACAGGCAGAAAATGAAGCTGATAGGATGGACTGGGTGAACAAAATTACTGGGGCTATCTCATCGCTTTTTAATTCCCAGTTTCTTCAAGAGCCTCATTATGGTAGATTGAATTTAGAAAATAAAAACTCAGCCATTGCTTCTTTGACTAGTCAGTCAGAGGATGGTCACAAATCTTTGACTGATGACATATATTCCAAGGAAGTCCTTAGTGTCTCCAAGATTTTAAGGGGAATTCATGGGAATGATAAATGTGCTGAGTGCAGTGCTTCTGATCCAGACTGGGCGTCTCTAAACCTTGGCATATTACTATGTATAGAATGCTCTGGAGTACATAGAAATCTCGGAGTTCATATCTCAAAGGTGAGATCTATAACATTAGATGTTAGGGTTTGGGAACCTACTATTTTGGAGTTATTTAATAAGTTGGGTAATGTTTATTGTAATTCTATATGGGAAGGCATACTTCAACTTGATGATGAAAGAGTAGGTGAATCAAATGGGCCAGCAAAACCATGCTTCATGGATGCCTTCCAAGACAAGGAAAAGTATATACATGCAAAGTATGTAGAGAAATCACTAGTAATCAGAGATGAGGATATACCAGGGAATCCTCCAGTTTCTGTAAGAATCTGGCAAGCAGTTAAAGCTATAAATGTACGCGAAGTGTATCGCCTTATTGTTACATCAAATTCCAATGTGATTAACACGAAATATGATGATGTGGTTCAACACGCCGATGCTAAAACCTTGGGCATAGAAGGCATTACAATCGATGAATATGAGCATGATCCAGAGGCTTGTCTGAGAAATAAACAGACTAATGAGGCAGAGAGCTGTTTCAATGGTTGGTCAATATTACATCTAGCATGTCATTCTGACAGTGCACTAATGGTTGAGTTGTTGCTCCAATTCGGTGCTGATGTAAACATGCGTGACTATCATGGGAGGACTCCCTTGCACCATTGCATTTCTAGTGGGAAAACTTCATTGGCGAAATTCCTTTTGAGACGGGGCGCAAGGCCGTCGGTTAAAGATGCTGGTGGACGCACCGTACTTGAAAGAGCAATGGAGATGGGAGCAATAACTGACGAAGAGCTATTTATCAAGCTCACCGAATGCCAGTAA 2349 0.4117 MAAAFVKLDDSPMFQKQLFSLEETADELKDRCQKLFKGCKKFMTALGEAYNGEVAFADSLEIFGGGQDDPVSVSIGGPVISKFISTLRELATFKELLRSQVEHVLIDRLMEFMNVDLQEAKDSRKRFDKAVQSYDQSREKFVSLKKNTPGDVVAELEEDLQNSKSAFEKSRFNLVNTLMNVEVKKKYEFLESISAIMDAHLRYFKLGYDLLSQMEPYIHQVLTYAQQSKEMANIEQDKLAKRIQEYRTQAEMENIRASSNTEPVLSTDGTHIVGLNSYKNFEGAMPPAAKGEVQTAKQGYLLKRSSHSRGDWKRRFFVLDNQGNLFYYRSKGAKPTGSQSSNYSRPSEQNSGMFGRFRSRHSRASSLNEDVLGCCTIDLCTSTIKMDAEDTDLRLCFRIISPSKTYTLQAENEADRMDWVNKITGAISSLFNSQFLQEPHYGRLNLENKNSAIASLTSQSEDGHKSLTDDIYSKEVLSVSKILRGIHGNDKCAECSASDPDWASLNLGILLCIECSGVHRNLGVHISKVRSITLDVRVWEPTILELFNKLGNVYCNSIWEGILQLDDERVGESNGPAKPCFMDAFQDKEKYIHAKYVEKSLVIRDEDIPGNPPVSVRIWQAVKAINVREVYRLIVTSNSNVINTKYDDVVQHADAKTLGIEGITIDEYEHDPEACLRNKQTNEAESCFNGWSILHLACHSDSALMVELLLQFGADVNMRDYHGRTPLHHCISSGKTSLAKFLLRRGARPSVKDAGGRTVLERAMEMGAITDEELFIKLTECQ* 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3505 782 ProSiteProfiles Ankyrin repeat region circular profile. 722 753 - -
Aev04g3505 782 MobiDBLite consensus disorder prediction 330 359 - -
Aev04g3505 782 PRINTS HIV Rev interacting protein signature 508 525 IPR001164 GO:0005096
Aev04g3505 782 PRINTS HIV Rev interacting protein signature 531 552 IPR001164 GO:0005096
Aev04g3505 782 PRINTS HIV Rev interacting protein signature 489 508 IPR001164 GO:0005096
Aev04g3505 782 Pfam Ankyrin repeats (3 copies) 682 753 IPR002110 GO:0005515
Aev04g3505 782 ProSiteProfiles Ankyrin repeat region circular profile. 689 720 - -
Aev04g3505 782 CDD ArfGap 481 596 - -
Aev04g3505 782 MobiDBLite consensus disorder prediction 333 356 - -
Aev04g3505 782 ProSiteProfiles ARF GTPase-activating proteins domain profile. 477 609 IPR001164 GO:0005096
Aev04g3505 782 Pfam Putative GTPase activating protein for Arf 481 602 IPR001164 GO:0005096
Aev04g3505 782 Pfam PH domain 297 427 IPR001849 -
Aev04g3505 782 ProSiteProfiles Ankyrin repeat profile. 722 754 IPR002110 GO:0005515
Aev04g3505 782 SUPERFAMILY PH domain-like 295 441 - -
Aev04g3505 782 Gene3D - 666 773 IPR036770 -
Aev04g3505 782 SMART PH_update 295 430 IPR001849 -
Aev04g3505 782 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD2 3 778 - -
Aev04g3505 782 Gene3D Arfaptin homology (AH) domain/BAR domain 7 253 IPR027267 -
Aev04g3505 782 CDD BAR_SFC_plant 16 217 IPR035670 -
Aev04g3505 782 Pfam BAR domain of APPL family 8 232 - -
Aev04g3505 782 ProSiteProfiles PH domain profile. 294 428 IPR001849 -
Aev04g3505 782 SMART 5bar 13 220 IPR004148 GO:0005515|GO:0005737
Aev04g3505 782 Gene3D Arf GTPase activating protein 459 608 IPR038508 -
Aev04g3505 782 ProSiteProfiles Ankyrin repeat profile. 689 721 IPR002110 GO:0005515
Aev04g3505 782 SMART ANK_2a 722 751 IPR002110 GO:0005515
Aev04g3505 782 SMART ANK_2a 689 718 IPR002110 GO:0005515
Aev04g3505 782 PANTHER CENTAURIN/ARF 3 778 IPR045258 GO:0005096
Aev04g3505 782 SUPERFAMILY Ankyrin repeat 676 775 IPR036770 -
Aev04g3505 782 SUPERFAMILY BAR/IMD domain-like 8 317 IPR027267 -
Aev04g3505 782 SUPERFAMILY ArfGap/RecO-like zinc finger 480 602 IPR037278 -
Aev04g3505 782 Coils Coil 229 249 - -
Aev04g3505 782 SMART arf_gap_3 477 609 IPR001164 GO:0005096
Aev04g3505 782 Gene3D - 288 440 IPR011993 -
Aev04g3505 782 CDD PH_ACAP 297 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3505 Aev-Chr4 33204449 33213612 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3505 489 603 C2H2 Transcription Factor Family AT4G21160 39.344 3.68e-17 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3505 K12489 - gmx:100796006 1301.58