Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3500 ATGGGAAGAAGATCCTCTGCTCTCTCTATTCACTCTGTTTACTCTGTTTTCGTCATCTCTGTGCTCTGTTTTCTCTCTCAAAAAACAACATCAGAGGACGATTCTCAAGCTCTTCTGGCACTGAAATCCTCCATAGATTCCTTCAACACGCTTCCATGGCGAACAGGGAGCGACGTGTGCACGTGGGAAGGGGTCAAAGAGTGCTTCAATGGAAGGGTGAGAAAGCTCGTTCTGGAACACTCCAACCTCACAGGAACCTTAGAATCGAAGATCCTGAACCGTTTGGAAGAACTTCGAGTCCTAAGCTTCAAAGGGAACTCACTCTCAGGTCAAATTCCAGAACTTTCCGGGTTAGTCAACCTCAAATCGATTTACCTCAACGACAACAACTTCTCCGGCGAGTTTCCATCCTCTGTTTCCGACCTCCACAGAGTCAAAGTCATCGTTTTCTCAGGGAACAGAATCTCCGGCAACATTCCGGCGTCGCTGCTGAAGCTCCGGCGACTCTACGTCCTCTACTTGGAGGACAACATGTTCACCGGAACCATACCAGGCTTCAACCAAACAAGCCTCAGGTACCTCAACCTCTCGAACAACAAGCTTTCTGGCGAGATTCCGGCGACTCCGGCGTTGGTACGTTTCAATGCGTCGTCTTTTTCAGGTAACCCTTCTCTCTGCGGTGAACAGATCCGCGTGCCATGCAAAAATGGCGGGTTTTTGCCTCCTTCTATGAGCCCAACTTTTCCCCTGATTCCCGGAGGAACAGCAGCAACAACAACAACAGAACACAAAAAATCATCAAACCGTAAGAAACTGATCAAGATAATTGGAGGGAGCGTTGGTGGGGTTGTTCTGTTGCTTATATGTTGTTTGATTCTTATGTTCTTCACTGTTTGTAGAAACCGTAGGAAGAGGGTGGGGTCTGGAACAAGAAGCAAAAGTGGTGGAGTTGGAAGTGTCGAGGAGGGTGAAGATGGTGGTGGAGGAGAAGGAGGCGGTGGTGGTGGTGGTGGCGGTGGCAGAGGAGGTAATAATGAAGGGAAACAAGGGGGTTTTGCATGGGAAGGTGAGGGTCTAGGGAAGTTGGTGTTCTGCGGAGCAGGGGATAGGGAAATGAGCTACACATTGGAGGATTTGCTCAAAGCTTCTGCTGAGACATTGGGTAGGGGTATTTTGGGAAGTACATATAAAGCAGTTATGGAATCAGGGTTTATTGTTACTGTTAAGAGGTTGAAGGATGCTAGGTACCCTGGTTTGGATGAGTTCAAGGCTCAGATTGAAGTTCTTGGGAGGCTTAGGCACCCTAACTTGGTCCCACTTAGGGCTTATTTTCAAGCTAAGGAGGAAAGACTTCTTGTTTATGATTATTTCCCCAATGGCAGCCTCTTCTCTCTCATTCATGGATCAAAAACATCTGGTGGAGGAAAGCCTCTTCATTGGACATCTTGCCTTAAAATCGCCGAAGACCTAGCGACCGGCCTTCTCTATATCCACCAGAACCCCGGCTTGACTCATGGAAACCTGAAATCTTCTAATGTCCTGTTGGGATCTGATTTCGAGTCCTGCCTCACTGACTACGGCCTTACCATGTTCCTTAACCCTGACTCAATGGACGAACCAAGCGCGACCTCTTTGTTCTACAGAGCACCCGAATGCCGAAGCTTTCAAAGATCAAACACTCAACCGGCTGATGTATACAGCTTCGGTGTCCTTCTTCTCGAGCTCTTAACAGGCAAAACACCCTTCCAAGACCTTGTCCAGACATACGGTTCAGATATACCGAGGTGGGTTAGGTCGGTCCGTGAGGAAGAGACGGAGTCAGGGGATGAACCTTCCTCAGGCAACGAAGCATCAGAGGAGAAGCTTCATGCACTCTTGAACATCGCAATGGCATGCGTACTAGGTGGAAGTCTCGTGCAATTGAGCATCTGA 1932 0.4855 MGRRSSALSIHSVYSVFVISVLCFLSQKTTSEDDSQALLALKSSIDSFNTLPWRTGSDVCTWEGVKECFNGRVRKLVLEHSNLTGTLESKILNRLEELRVLSFKGNSLSGQIPELSGLVNLKSIYLNDNNFSGEFPSSVSDLHRVKVIVFSGNRISGNIPASLLKLRRLYVLYLEDNMFTGTIPGFNQTSLRYLNLSNNKLSGEIPATPALVRFNASSFSGNPSLCGEQIRVPCKNGGFLPPSMSPTFPLIPGGTAATTTTEHKKSSNRKKLIKIIGGSVGGVVLLLICCLILMFFTVCRNRRKRVGSGTRSKSGGVGSVEEGEDGGGGEGGGGGGGGGGRGGNNEGKQGGFAWEGEGLGKLVFCGAGDREMSYTLEDLLKASAETLGRGILGSTYKAVMESGFIVTVKRLKDARYPGLDEFKAQIEVLGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGSLFSLIHGSKTSGGGKPLHWTSCLKIAEDLATGLLYIHQNPGLTHGNLKSSNVLLGSDFESCLTDYGLTMFLNPDSMDEPSATSLFYRAPECRSFQRSNTQPADVYSFGVLLLELLTGKTPFQDLVQTYGSDIPRWVRSVREEETESGDEPSSGNEASEEKLHALLNIAMACVLGGSLVQLSI* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3500 643 Pfam Leucine rich repeat N-terminal domain 32 65 IPR013210 -
Aev04g3500 643 ProSiteProfiles Leucine-rich repeat profile. 190 212 IPR001611 GO:0005515
Aev04g3500 643 Pfam Protein kinase domain 384 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev04g3500 643 Gene3D Ribonuclease Inhibitor 30 187 IPR032675 -
Aev04g3500 643 Gene3D Ribonuclease Inhibitor 188 237 IPR032675 -
Aev04g3500 643 Pfam Leucine rich repeat 120 178 IPR001611 GO:0005515
Aev04g3500 643 Gene3D Phosphorylase Kinase; domain 1 366 456 - -
Aev04g3500 643 MobiDBLite consensus disorder prediction 306 350 - -
Aev04g3500 643 ProSiteProfiles Protein kinase domain profile. 381 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev04g3500 643 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 6 633 - -
Aev04g3500 643 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 6 633 - -
Aev04g3500 643 Gene3D Transferase(Phosphotransferase) domain 1 457 635 - -
Aev04g3500 643 SUPERFAMILY Protein kinase-like (PK-like) 385 585 IPR011009 -
Aev04g3500 643 SUPERFAMILY L domain-like 30 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3500 Aev-Chr4 33177675 33182039 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3500 5 633 Receptor kinase-like Gene Family AT1G60630 59.685 0.0 695
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aev04g3500 Pkinase 7.8e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3500 - - gmx:100809866 897.116