Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3477 ATGGGAAGGTCTCCTTGCTGTGAGAAAGCACACACAAACAAAGGAGCATGGACGAAAGAAGAAGATGACAGGCTCATATCTTACATTAGAGCTCATGGTGAAGGTTGCTGGCGATCTCTCCCCAAAGCGGCGGGTCTTCTCCGGTGCGGCAAGAGCTGCCGTCTCCGGTGGATCAACTACCTCCGACCTGACCTCAAGAGAGGCAACTTCACTGAAGAAGAAGATGAACTCATCATCAAACTCCATAGCCTCCTTGGTAACAAGTGGTCTTTGATAGCTGGAAGATTGCCAGGAAGAACAGACAATGAGATAAAGAACTATTGGAACACACACATAAGGAGGAAGCTTCTGAGCAGAGGAATTGACCCTGCAACTCATAGGCCTCTCAACGAAGCTGCATCAATTTCTCAGAATCAAGAACAATCATCTGTTGTAGCAGCAGCAGCAACAACTATATCTTTTGCTTCCTCTGTTCCTACTGCTACAGTAGCAGTTAAAACAGAGCAAGAGAATACTACTACTACTACAAGTAATAGCAACGCAAGCATGTTTGGGATTGTGGAGAACAATAATAAAGATGTGAAAAGATCATCATCATCATCAGTATTGTTGGAAAAATGCCCTGATTTGAACCTTGAGTTGAGTATTAGTCCTCCACGCCATCTTGAGCAAGAACAGAGTTTCAAGGTTATGGAGAGAAGCCTCTGTTTTGTTTGCAGTTTGGGTTTGCAGAACAGCAAGGATTGCAGGTGTGGGATTGGCGGTGCTAACATTGCAGGAAGCACTAGTAATGCTAATGGTAATAGCGGTAGTGGTTCTGGTTATGATTTCTTGGGGTTGAAAACCGGTGTTTGGGATTATAGAAGCTTGGAAATGAAGTGA 882 0.4433 MGRSPCCEKAHTNKGAWTKEEDDRLISYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLSRGIDPATHRPLNEAASISQNQEQSSVVAAAATTISFASSVPTATVAVKTEQENTTTTTSNSNASMFGIVENNNKDVKRSSSSSVLLEKCPDLNLELSISPPRHLEQEQSFKVMERSLCFVCSLGLQNSKDCRCGIGGANIAGSTSNANGNSGSGSGYDFLGLKTGVWDYRSLEMK* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3477 293 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Aev04g3477 293 CDD SANT 69 112 IPR001005 -
Aev04g3477 293 CDD SANT 16 61 IPR001005 -
Aev04g3477 293 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Aev04g3477 293 Gene3D - 68 144 - -
Aev04g3477 293 SMART sant 66 114 IPR001005 -
Aev04g3477 293 SMART sant 13 63 IPR001005 -
Aev04g3477 293 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Aev04g3477 293 Gene3D - 14 66 - -
Aev04g3477 293 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Aev04g3477 293 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Aev04g3477 293 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 256 - -
Aev04g3477 293 PANTHER TRANSCRIPTION REPRESSOR MYB4 1 256 - -
Aev04g3477 293 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Aev04g3477 293 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3477 Aev-Chr4 33008262 33009281 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3477 1 293 MYB Transcription Factor Family AT4G38620 58.249 5.23e-117 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev04g3477 Myb_DNA-binding 2.5e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3477 K09422 - tcc:18607558 369.777