Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3446 ATGGGTTTCCGTCTACCTATAATTCGAAGGGCATCCTTCTCTTCTAGCCAATCAGCTTCAAAATCCATGGAAGTCCCAAAGGGCTATCTTGCAGTGTATGTTGGAGAGAATCAGAAGCGGTTCGTGATCCCGATATCATACTTGAACCAACCTTCATTCCAAGAGCTGTTGTGTCAAGCTGAGGAAGAGTTCGGATATGATCATCCAATGGGAGGTCTCACAGTTCCTTGCAGTGAACATGTCTTCCAACAAATCACTTCTCGCTTGAATCGACTATAA 279 0.4444 MGFRLPIIRRASFSSSQSASKSMEVPKGYLAVYVGENQKRFVIPISYLNQPSFQELLCQAEEEFGYDHPMGGLTVPCSEHVFQQITSRLNRL* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3446 92 Pfam Auxin responsive protein 10 88 IPR003676 GO:0009733
Aev04g3446 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 90 IPR003676 GO:0009733
Aev04g3446 92 PANTHER AUXIN-INDUCED PROTEIN 6B 1 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3446 Aev-Chr4 32871419 32871697 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3446 14 83 Calmodulin-binding Proteins AT3G43120 48.571 2.80e-18 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3446 K14488 - gmx:100816803 147.517