Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3424 ATGGGCATTATTAGAAAACCAAACAAGCTCAACCAAAGTGCAGTCCTAAAGCAAATCCTCAAGAGGTGTTCGAGCTTAGGCAAGAAACATGGGTACGATGATGATGGTCTCCCCCTTGATGTCCCAAAAGGCCACTTTGCTGTGTATGTTGGTGAGAACAGGAGCAGGTACATAGTACCTATCTCATTCTTGGCTCACCCTCACTTTCAATCTCTCCTTCGAAGAGCTGAGGAAGAGTTTGGCTTTGATCATGACATGGGTCTCACTATTCCTTGTGAAGAAGTTGTTTTCAAGTCTCTAACTTCATCAATCATCCGATGA 321 0.4393 MGIIRKPNKLNQSAVLKQILKRCSSLGKKHGYDDDGLPLDVPKGHFAVYVGENRSRYIVPISFLAHPHFQSLLRRAEEEFGFDHDMGLTIPCEEVVFKSLTSSIIR* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3424 106 Pfam Auxin responsive protein 33 103 IPR003676 GO:0009733
Aev04g3424 106 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 8 105 IPR003676 GO:0009733
Aev04g3424 106 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 8 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3424 Aev-Chr4 32816110 32816430 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3424 38 104 Calmodulin-binding Proteins AT3G43120 56.716 9.77e-22 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3424 K14488 - pop:7477848 190.274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3424 04 32816110 32816430 Aev04g3424 04 32816110 32816430 ECH
Aev04g3424 04 32816110 32816430 Aev05g0431 05 2987126 2987446 ECH
Aev04g3424 04 32816110 32816430 Aev08g0209 08 1167609 1167932 ECH