Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3421 ATGGCGGCTCCACCACCAAACCTCTCTCTCCCCTCCACCACCACCACAAAGCCCAACCCTCTCCCCTTTTTCCACACCAAAACCCTCCCTAAACCCGCCACCACCACCCTACCTTCACGCGCCGCCTTCCACAAAACCCTCTCCGCCAAAAACCCCATATCCCACCACATCATCTCTGCAAAATCCGCCGAACCCTCTTTCGATGACGATGACGAAAAGCCACGCGAGGAGTGCGGCGTTGTGGGAATCTACGGCGACCCAGAAGCCTCTCGCCTCTGCTACCTTGCCCTCCATGCCCTCCAGCACCGCGGCCAAGAAGGCGCCGGAATCGTAACCGTGAACAATAACGTCCTCCAATCCATCACCGGCGTTGGCCTCGTCTCCGACGTATTCAACCAATCCAAGCTCGACCAGTTACCCGGTAACCTTGCCATCGGCCATGTCCGTTACTCCACCGCCGGCCAATCGATGCTCAAAAACGTCCAACCCTTCGTCGCCGGCTACCGGTTCGGCTCCGTCGGCGTCGCCCACAACGGTAATCTCGTTAATTACAGAACATTAAGGGCAAAACTTGAAGAGAACGGTTCAATTTTTAACACAACCTCTGATACAGAGGTTGTTCTTCACCTTATTGCTACATCAAAGCATAGACCTTTTATATTGAGAATCGTTGATGCATGTGAGAAACTTGAAGGGGCTTATTCAATTGTGTTTGTTACTGAGGATAAGCTTGTTGCTGTTAGGGACCCTTTTGGGTTTAGGCCTTTGGTTATGGGTAGGAGGAGTAATGGTGCTGTTGTTTTTGCTTCTGAGACTTGTGCTCTTGATTTGATTGAAGCTACTTATGAAAGAGAGGTGTACCCTGGTGAGGTTCTTGTTGTGGACAAAAATGGGGTCCAGAGTCTCTGCCTTATGTCTCATCCACAACCGAAACAGTGTATCTTTGAGCATATTTACTTTGCTCTTCCGAATTCTGTTGTTTTTGGGAGGTCTGTGTATGAATCTAGGAGGAAATTTGGTGAGATTCTTGCAACAGAGAGCCCTGTGGACTGTGATGTTGTGATTGCTGTGCCTGATTCTGGTGTTGTTGCTGCTCTTGGCTATGCTGCGAAAGCCGGTGTCCCTTTCCAGCAAGGACTGATCAGGTCACACTATGTTGGCAGGACATTCATTGAGCCATCTCAGAAGATTAGGGACTTTGGTGTGAAGCTCAAGCTCTCGCCGGTTCGCGCCGTTCTCGAAGGCAAAAGGGTTGTGGTGGTTGATGACTCAATTGTGAGGGGAACAACATCCTCAAAGATTGTTAGGTTGCTTAAGGAAGCTGGTGCTAAGGAAGTTCACATGAGGATAGCAAGCCCACCAATCATAGGTTCATGTTACTATGGTGTGGACACACCAAGCTCTGAGGAATTGATTTCAAATAGGATGAGTGTTGAGGAGATAAGGGAGTTTATTGGGTCTGATTCACTTGCTTTTCTACCATTTGATAGCTTGAAGAGGCTCTTGGGGAATGATTCCCCTAATTTCTGCTATGCTTGCTTCTCTGGTAACTACCCTGTTGAACCAAGAGAGCTTAAGGTGAAGAGGGTTGGTGATTTTGTGGATGATGGGTTAAATGGGAGTTTGGAGTCCATTGATGGTGGTTGGGTCCAAGCAAATCGAAGTCCCAAAGACTTGAAGGTTGGTACTGGTCTCTGA 1698 0.4888 MAAPPPNLSLPSTTTTKPNPLPFFHTKTLPKPATTTLPSRAAFHKTLSAKNPISHHIISAKSAEPSFDDDDEKPREECGVVGIYGDPEASRLCYLALHALQHRGQEGAGIVTVNNNVLQSITGVGLVSDVFNQSKLDQLPGNLAIGHVRYSTAGQSMLKNVQPFVAGYRFGSVGVAHNGNLVNYRTLRAKLEENGSIFNTTSDTEVVLHLIATSKHRPFILRIVDACEKLEGAYSIVFVTEDKLVAVRDPFGFRPLVMGRRSNGAVVFASETCALDLIEATYEREVYPGEVLVVDKNGVQSLCLMSHPQPKQCIFEHIYFALPNSVVFGRSVYESRRKFGEILATESPVDCDVVIAVPDSGVVAALGYAAKAGVPFQQGLIRSHYVGRTFIEPSQKIRDFGVKLKLSPVRAVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIGSCYYGVDTPSSEELISNRMSVEEIREFIGSDSLAFLPFDSLKRLLGNDSPNFCYACFSGNYPVEPRELKVKRVGDFVDDGLNGSLESIDGGWVQANRSPKDLKVGTGL* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3421 565 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 78 297 IPR017932 -
Aev04g3421 565 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 22 550 - -
Aev04g3421 565 CDD PRTases_typeI 340 451 IPR000836 -
Aev04g3421 565 CDD GPATase_N 78 328 IPR035584 -
Aev04g3421 565 Pfam Glutamine amidotransferase domain 156 275 IPR017932 -
Aev04g3421 565 MobiDBLite consensus disorder prediction 1 23 - -
Aev04g3421 565 Hamap Amidophosphoribosyltransferase [purF]. 77 518 IPR005854 GO:0004044|GO:0009113
Aev04g3421 565 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 78 301 IPR029055 -
Aev04g3421 565 TIGRFAM purF: amidophosphoribosyltransferase 78 519 IPR005854 GO:0004044|GO:0009113
Aev04g3421 565 MobiDBLite consensus disorder prediction 7 22 - -
Aev04g3421 565 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 78 519 IPR029055 -
Aev04g3421 565 SUPERFAMILY PRTase-like 313 524 IPR029057 -
Aev04g3421 565 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 2, CHLOROPLASTIC 22 550 - -
Aev04g3421 565 Pfam Phosphoribosyl transferase domain 337 447 IPR000836 -
Aev04g3421 565 Gene3D - 337 501 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3421 Aev-Chr4 32794540 32796237 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3421 68 551 PRT Gene Family AT2G16570 87.037 0.0 870
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3421 K00764 - gmx:100791919 968.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3421 04 32794540 32796237 Aev04g3421 04 32794540 32796237 ECH