Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3420 ATGGATTGGGGAGAGAGAGAAGAAAATGAGGTCGGAATGAAATTGAAATTGGGGCGAAATGAAATTCTTATTAAATTCACGCGTAGTAGTCATGAAATCCGTGTAGTAGAAGTAGCAGTAGTCATCGTCGTCGTTGTTAGAAAGAGAAAATTATCATCACCTGCACTTGATTGGGTTCGTCCATTTTCGGATTTTTCAACTTGTAAGAACCAACCAAACAAAACAAAAAAGCTTATAAATAGAAGTGTTTCATTTTGTTTTTCTTTGTTTAATTTAGTGATGGGAGACAATGAAGGTGTTAATGGTGAAATGATGCAGAGGGTACAATCGTCATTTGGAACATCATCATCGTCGTTTGTTAAACAAGGTCTGAGCATGGACCAGCTCACAATACCTCAATTCACACCTTCACATCAAATGCGTGGCGGTGGCGCCACCGCAAGGGTTCACCATTCTTACGGCGGAGATGGAGCCAGACGAGCAGGGATTCCGATACCACCGTCTCATCACCCGCACCAGATCCCACCCATTTCACCTTACTCTCAGATCCCTCCATCATCACCATCACTGCACCACCAACAAGCGGGTTCACCTACACCCACCCACACCCGATCCCTCTCCCAGCCTTCCTTCTTCTCACTGGACTCTCTCCCACCGCTGAGCCCTTCACCATTCCGGGACTCATCAACTTCAATCTCCGACTCTGCTGACGTCTCCATGGAGGACCGTGACGTCACCTCCCACTCACACTCTCACTCGCACTCGCACTCGCACTCTCTTCTCCCTCCATCCTCCCCTTTCTCTGCTGCTGCCCGGGGCAGCAACAGCCCTCTGCCCGTTCCGCGAAAATCGCACCGGCGTTCAAACAGCGACATCCCGTTCGGATTCTCCAACGTTGTTCTAAACTCATCACCGCCACTGGTACCTCTCAGAGGTGGTGCTGCTGCTGCTTCGAATTCTTCGAATCCGGCGCAGTTTATAAAGAAGGAAGACGCGGAGGGATCAGGGGAGAAGAAATTCTCGCCGGAGGGTGAAGTAGGGGTGGACGATCTCTTCTCTGCGTACATGAACTTGGACAACATCAACGACGCGTTGAATAACAATTCTTCCGATGAGAAGAATGGCACAGAGAATAATGATTTGGATAGTAGGGCGAGTGGGACGAAGACTAATAACACTGGTGGTGGTGATAGCAGCGACAATGAAGCTGAGAGCAGTGTTAACGAGCAAGGTGGTGGTGGAGGAGGAATGAAGAGGAGTGCTGGTGGTGATGTTGTTGGTGCTGCTGCTACTCCGACGAGTAGGCACTATAGGAGTGTTTCGATGGATAGTTTTATTGGGAAGTTGAGTTTCAATTATCATGATTCATTGCCGAATAAGATGATGATTCCGCCTTCTTCGCCTGGTTCTCGTCCCGCCACTAGTAATGGGGTTGATGGGAATTCGAGTGGTTTCAGCTTGGAGTTTGGGAATGGTGAGTTCAGTGGACCTGAGTTGAAGAAGATCATGGCTAATGAGAAGCTTGCTGAGATTGCCATGACGGAGCCTAAACGTGCAAAGAGGATTTTGGCTAATCGGCAATCAGCTGCGCGGTCCAAAGAACGGAAGATGCGTTACATTTCTGAGCTAGAACACAAGGTTCAGACCCTGCAGACTGAGGCTACCACACTCTCTGCACAGCTTACTCTGTTGCAGAGAGATTCTGTTGGACTCACTAACCAGAATAGTGAGTTGAAGTTTCGCCTTCAATCCATGGAGCAACAGGCAAAACTCCGAGATGCTCTAAATGAGGCTCTAACTGCTGAGGTTCAAAGACTAAAGCTCGCTACAGCTGAGCTGAACAGGGAGTCGCACCCTTCAAGCTGCTTGATTCCGCAACATTCCGTCAACCCTCTGATGTTCCAGCAGCAGCAGCCTCCGAACGCTGCTCAACAAAACATCCATCTTCAACAACAGCAGCCGCCGCCGCAGCAGAATTGTAATGCCAACTCGAAGACCGACTTAAAACAATAG 2013 0.4888 MDWGEREENEVGMKLKLGRNEILIKFTRSSHEIRVVEVAVVIVVVVRKRKLSSPALDWVRPFSDFSTCKNQPNKTKKLINRSVSFCFSLFNLVMGDNEGVNGEMMQRVQSSFGTSSSSFVKQGLSMDQLTIPQFTPSHQMRGGGATARVHHSYGGDGARRAGIPIPPSHHPHQIPPISPYSQIPPSSPSLHHQQAGSPTPTHTRSLSQPSFFSLDSLPPLSPSPFRDSSTSISDSADVSMEDRDVTSHSHSHSHSHSHSLLPPSSPFSAAARGSNSPLPVPRKSHRRSNSDIPFGFSNVVLNSSPPLVPLRGGAAAASNSSNPAQFIKKEDAEGSGEKKFSPEGEVGVDDLFSAYMNLDNINDALNNNSSDEKNGTENNDLDSRASGTKTNNTGGGDSSDNEAESSVNEQGGGGGGMKRSAGGDVVGAAATPTSRHYRSVSMDSFIGKLSFNYHDSLPNKMMIPPSSPGSRPATSNGVDGNSSGFSLEFGNGEFSGPELKKIMANEKLAEIAMTEPKRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSVGLTNQNSELKFRLQSMEQQAKLRDALNEALTAEVQRLKLATAELNRESHPSSCLIPQHSVNPLMFQQQQPPNAAQQNIHLQQQQPPPQQNCNANSKTDLKQ* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3420 670 MobiDBLite consensus disorder prediction 134 289 - -
Aev04g3420 670 Coils Coil 596 616 - -
Aev04g3420 670 MobiDBLite consensus disorder prediction 330 344 - -
Aev04g3420 670 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 206 666 - -
Aev04g3420 670 MobiDBLite consensus disorder prediction 363 427 - -
Aev04g3420 670 MobiDBLite consensus disorder prediction 184 236 - -
Aev04g3420 670 CDD bZIP_plant_RF2 518 567 IPR044759 GO:0003700|GO:0006355
Aev04g3420 670 SUPERFAMILY Leucine zipper domain 517 568 IPR046347 GO:0003700|GO:0006355
Aev04g3420 670 SMART brlzneu 513 577 IPR004827 GO:0003700|GO:0006355
Aev04g3420 670 MobiDBLite consensus disorder prediction 311 344 - -
Aev04g3420 670 MobiDBLite consensus disorder prediction 637 670 - -
Aev04g3420 670 Gene3D - 516 568 - -
Aev04g3420 670 MobiDBLite consensus disorder prediction 168 183 - -
Aev04g3420 670 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 515 578 IPR004827 GO:0003700|GO:0006355
Aev04g3420 670 MobiDBLite consensus disorder prediction 256 272 - -
Aev04g3420 670 Coils Coil 533 567 - -
Aev04g3420 670 MobiDBLite consensus disorder prediction 363 408 - -
Aev04g3420 670 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN 206 666 - -
Aev04g3420 670 Pfam bZIP transcription factor 516 571 IPR004827 GO:0003700|GO:0006355
Aev04g3420 670 MobiDBLite consensus disorder prediction 237 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3420 Aev-Chr4 32787337 32791648 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3420 94 636 bZIP Transcription Factor Family AT4G38900 53.497 1.57e-154 456
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aev04g3420 bZIP_1 5.6e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3420 - - aip:107628829 615.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3420 04 32787337 32791648 Aev04g3420 04 32787337 32791648 ECH