Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3409 ATGCGAACCCTTTGTGACGTATGCGAAAGCGCTGCTGCAATCCTCTTCTGCGCCGCAGACGAGGCTGCTCTCTGTCGTGCTTGTGATGATAAGGTACATATGTGTAATAAACTTGCTAGTAGACATGTTAGGGTTGGGCTTGCTGACCCAACAGATGTTCCACGTTGTGATATATGTGAAAATGCACCAGCTTTCTTTTACTGTGAGATAGATGGTAGTTCGCTATGTCTGCAATGTGATATGATTGTACATGTTGGCGGTAAAAGAACCCATGAAAGATATCTTCTGTTGAGGCAGAGAGTTGAGTTTCCAGGTGACAAAATTGGCCGATTGGAAGAATTGGGGCTGCAAACCATCGATCCAAATGAATTGAGAAAGGACCAAAGTCAGCCAGCTAAGTTAAAAACAAGAGATGGTCACCAGAATCACAGGATCACGAATGTACCAATGCTAGAAAATAATGTAGATAGTCATGGAAAAATGGATAAAAAGTTCATTGATCTCAATACAAGGCCACAACGATTAAATGGAACTGCATCAAACAACATGGATAGAGATATCTTGAGTGGCAATCATCATGAATCTGTTGGTGTGGTACCTGTAGAATTGTTCAAACAAGAAGCTGAGAAGCAATAA 636 0.4151 MRTLCDVCESAAAILFCAADEAALCRACDDKVHMCNKLASRHVRVGLADPTDVPRCDICENAPAFFYCEIDGSSLCLQCDMIVHVGGKRTHERYLLLRQRVEFPGDKIGRLEELGLQTIDPNELRKDQSQPAKLKTRDGHQNHRITNVPMLENNVDSHGKMDKKFIDLNTRPQRLNGTASNNMDRDILSGNHHESVGVVPVELFKQEAEKQ* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3409 211 CDD Bbox1_BBX-like 4 47 - -
Aev04g3409 211 PANTHER B-BOX ZINC FINGER PROTEIN 21 1 210 - -
Aev04g3409 211 ProSiteProfiles Zinc finger B-box type profile. 51 96 IPR000315 GO:0008270
Aev04g3409 211 SMART bboxneu5 1 47 IPR000315 GO:0008270
Aev04g3409 211 SMART bboxneu5 51 96 IPR000315 GO:0008270
Aev04g3409 211 CDD Bbox1_BBX-like 56 96 - -
Aev04g3409 211 Gene3D Classic Zinc Finger 2 95 - -
Aev04g3409 211 Pfam B-box zinc finger 53 92 IPR000315 GO:0008270
Aev04g3409 211 Pfam B-box zinc finger 3 42 IPR000315 GO:0008270
Aev04g3409 211 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Aev04g3409 211 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3409 Aev-Chr4 32715348 32717303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3409 1 210 C2C2-CO-like Transcription Factor Family AT4G38960 60.000 1.93e-86 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Aev04g3409 zf-B_box 3.4e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3409 - - gmx:100527369 346.28