Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3403 ATGGAAGTTGTGGTGGCGAAAGCGTTGAAATCAAGCTTGAGGAGAGAGCTTATTTTCCAGCAACCACTTGCACGCGCCGAGGAGATTCTTTGTTTCAACGCTAATAATAATAATAACAACGTTGTTGTTGGTGGTGAAGATTTCTCCGTCGACGACCTCTTCGATTTTTCCAACGGCGAATTCCAACATGTCGGAAAGGGAATCGATGTCTTCGAAGAAATAGAAGAAGATTTTGAAGATGATGAAAAAGACAGAACCTCCTCAGAATCTTCACAGGACCACACAGAAGAAGATACAAACTCTAATTCCACCGGCGCCGGTGACTCTGACTCCATTTTTGCCGGCGAGTTAGCCGTTCCGGACGATGATTTGGCGGACTTGGAATGGGTTTCTCACTTTGTGGACGATTCAATACCGGAGCTCTCTCTTATGTACCCCATACGTACCGAGCCCATGAGGGCCCGGGCCGAACCGGAGCCCAAACTGGGCTCAGTACACATTCCTCCTCTTCGCTCTGAAGTCTCCACTAAGCCCAGGACCACCAAGACCAGAAAGCCCAACCGTCGTTTCTGGACCTTCACCGCCTTGCTCTCACCTCCCTCTTCGCCGTCATCGTGCTCCTCCGTGTTGTCGTCCACGGCAGCGCCTGTGTTCGCCGGCGAGCCTCCGGCGAAGAAGCAGAAGAGAAAGCCCGAGGTCCAAGCCTTCGGGCCCCAGTTTCAGCGAAGGTGCACTCATTGCCAGGTGCAGAAAACGCCGCAGTGGAGGACCGGGCCGCTAGGCCCGAAGACACTCTGCAACGCATGCGGAGTTCGTTACAAGTCGGGCAGGCTTTTCCCAGAGTACAGGCCCGCATGCAGCCCAACGTTCTCCGGGGACATTCACTCGAACAGCCACCGTAAGGTGCTGGAGATGAGGCGCAGGAAGGATATGTCTGGGCCAGAGCCCGGTCTGGACCGGGTCCAAATGATCCCTAGTTGCTGA 984 0.5417 MEVVVAKALKSSLRRELIFQQPLARAEEILCFNANNNNNNVVVGGEDFSVDDLFDFSNGEFQHVGKGIDVFEEIEEDFEDDEKDRTSSESSQDHTEEDTNSNSTGAGDSDSIFAGELAVPDDDLADLEWVSHFVDDSIPELSLMYPIRTEPMRARAEPEPKLGSVHIPPLRSEVSTKPRTTKTRKPNRRFWTFTALLSPPSSPSSCSSVLSSTAAPVFAGEPPAKKQKRKPEVQAFGPQFQRRCTHCQVQKTPQWRTGPLGPKTLCNACGVRYKSGRLFPEYRPACSPTFSGDIHSNSHRKVLEMRRRKDMSGPEPGLDRVQMIPSC* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3403 327 PANTHER GATA TRANSCRIPTION FACTOR 1 327 - -
Aev04g3403 327 MobiDBLite consensus disorder prediction 76 113 - -
Aev04g3403 327 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 241 301 - -
Aev04g3403 327 ProSiteProfiles GATA-type zinc finger domain profile. 238 274 IPR000679 GO:0006355|GO:0043565
Aev04g3403 327 PIRSF Txn_fac_GATA_plant 22 322 IPR016679 GO:0003677|GO:0005634|GO:0045893
Aev04g3403 327 ProSitePatterns GATA-type zinc finger domain. 244 269 IPR000679 GO:0006355|GO:0043565
Aev04g3403 327 Gene3D - 238 311 IPR013088 GO:0006355|GO:0008270
Aev04g3403 327 CDD ZnF_GATA 243 300 IPR000679 GO:0006355|GO:0043565
Aev04g3403 327 SMART GATA_3 238 292 IPR000679 GO:0006355|GO:0043565
Aev04g3403 327 Pfam GATA zinc finger 244 277 IPR000679 GO:0006355|GO:0043565
Aev04g3403 327 PANTHER GATA TRANSCRIPTION FACTOR 1 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3403 Aev-Chr4 32690136 32691241 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3403 8 326 C2C2-Gata Transcription Factor Family AT5G66320 39.828 1.88e-53 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Aev04g3403 GATA 6.6e-16 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3403 - - adu:107476627 444.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3403 04 32690136 32691241 Aev04g3403 04 32690136 32691241 ECH