Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3385 ATGGCTTCCGATTCTTTCAACAACGGTCCTTCATCGCCCGATGATTCCCTTTCCAGCCCAATCGGCAACACCTTCTCCTCCCCCGGCGATGCTGCCCGCCGGAGGCGTCATCGCCGCTCCACCACGCCCTCTGGGTTCGGTACCCCGCCGGCTCACCGCTCTCGATTCGCCACCGACGCTACTCCTACTCCTTCGCGCTCCCGGCATAGATCCGGCGGCGGTGGCGGCGGTGTCCCCGCCACTCCGACCTCCACCGATGACATTCCGGCGTCGTCTGAAGGTGGTGACGGCTACGACATGGAAGACCCAAGGCCTACCTTCGTTTGGGGAACTAACATTAGCGTCGAAGACGTGAACGACGCGATTCAGAGGTTCCTTAGGGATTTCAGAGACGTTTCGTCACAGAATGAAGATGACTTGTTGCACACCGAAGGGAAGTACGAGAAGCTGATCAAACAGGTGATTGAATTTGAAGGAGATTCTCTGGATGTTGATGCGCGTGACGTGTTCGATCACGACCCTGATTTGTACACGAAGATGGTTAGGTACCCACTTGAGGTGCTTGCGATCTTTGATTTGGTTCTGATGAATATGGTTAGCAGGATTAAACCTATGTTTGAGAAGCATATACAGACTCGGATTTTCAATCTCAAATCCTCTACTTCAATGAGGAATTTGAACCCTTCTGATGTTGAGAGGATGGTGTCGATGAAGGGTATGATTATACGGTGTAGCTCAGTCATACCAGAAATAAGGGAAGCTATATTTAGGTGTCTTGTGTGTGGATTCTGCACTGACCCTGTTGCTGTAGAGAGAGGACGAATTACTGAACCTACTATATGCTCGAGGGAGGAGTGTCAGTCCAGGAACTCCATGACACTGGTTCACAACCGATGCAGGTTTACTGATAAGCAAATTGTGAGGCTCCAGGAGACACCTGATGAGATACCTGAAGGAGGGACACCTCACACAGTCAGCTTGCTGATGCATGACAAGCTGGTGGATTGTGGAAAGCCAGGTGATAGAGTTGAGGTGACTGGTATTTATAGGGCTATGAGTGTTAGGGTTGGACCAACTCAGAGAACTGTTAAATCATTGTTCAAGACTTATATTGACTGTCTTCACATAAAGAAGACTGACAAGTCAAGGATGCTAGTAGAGGATGCTATGGAGGTTGATAATGGCTCAGGCAGAAATGCGGAAGAAGTTCTTTTCAATGAAGAAAAGGTTGCTCAACTGAAGGAGCTCTCAAAACAGCCAGATATATATGAAAGATTGACAAAGTCATTAGCACCAAACATCTGGGAGCTAGATGATGTGAAGAAAGGTCTTCTTTGTCAGCTGTTTGGTGGCAATGCTTTGAAGTTGGCATCTGGTGCTAGCTTCCGTGGTGATATAAATATTCTTCTTGTTGGTGATCCTGGTACGAGCAAGTCTCAACTTCTTCAATACATTCACAAACTATCTCCCCGGGGCATATACACCAGCGGAAGGGGGAGTTCTGCTGTTGGATTGACGGCTTACGTGACCAAGGACCCTGAAACAGGGGAAACTGTTCTTGAGAGTGGTGCCTTAGTTTTGAGTGACCGAGGTATTTGCTGTATAGATGAATTTGACAAAATGTCTGACAGCGCAAGGAGCATGTTACATGAGGTGATGGAACAACAAACTGTTTCAATAGCAAAGGCGGGTATTATTGCTTCCCTCAATGCCAGGACTTCAGTGTTGGCTTGTGCTAATCCGAGTGGGTCACGATACAATCCTCGTTTGTCTGTCATTGATAACATACACCTTCCTCCCACTCTTCTGTCCAGGTTCGATTTAATTTACTTGATTCTTGACAAGGCTGATGAACAGACTGACCGACGACTTGCCAAACATATTGTTTCGTTACACTTTGATAATCCTGAGAGCTTGGAGCAAGATGTGCTCGACCTATCTACATTAACTGATTATGTAAGCTATGCTCGAAAGCACATACACCCTCAGCTGTCTGATGAAGCTGCTGAAGAATTAACTAGAGGTTATGTTGAAATAAGAAAAAGAGGAAATTTCCCCGGGAGCAGCAAAAAGGTGATAACAGCAACACCAAGGCAAATTGAGAGTCTGATACGCCTTAGTGAAGCATTGGCTCGGATTCGCTTCTCAGAATGGGTCGAAAAGCATGATGTAATGGAGGCATTCCGGCTTCTTGAAGTTGCAATGCAACAGTCTGCAACGGATCACTCTACTGGAACAATTGACATGGATCTTATTACTACCGGAGTTTCGGCAAGTGAAAGGATGAGACGAGAGAGTCTGCTACAAGCAACCCGCAACATAATCATGGAGAAGTTGCAAATTGGGGGACCATCCATGCGGTTATTGGAGTTATTGGAAGAGTTGAAGAATCAGAACACAAGCAGTGAAATTCATCTCAATGATCTAAGGAATGCAGTTTCTAGTCTCGCTAGCGAAGGATTTGTTACCATGCACGGTGACAGCGTAAAGAGATCATGA 2499 0.4666 MASDSFNNGPSSPDDSLSSPIGNTFSSPGDAARRRRHRRSTTPSGFGTPPAHRSRFATDATPTPSRSRHRSGGGGGGVPATPTSTDDIPASSEGGDGYDMEDPRPTFVWGTNISVEDVNDAIQRFLRDFRDVSSQNEDDLLHTEGKYEKLIKQVIEFEGDSLDVDARDVFDHDPDLYTKMVRYPLEVLAIFDLVLMNMVSRIKPMFEKHIQTRIFNLKSSTSMRNLNPSDVERMVSMKGMIIRCSSVIPEIREAIFRCLVCGFCTDPVAVERGRITEPTICSREECQSRNSMTLVHNRCRFTDKQIVRLQETPDEIPEGGTPHTVSLLMHDKLVDCGKPGDRVEVTGIYRAMSVRVGPTQRTVKSLFKTYIDCLHIKKTDKSRMLVEDAMEVDNGSGRNAEEVLFNEEKVAQLKELSKQPDIYERLTKSLAPNIWELDDVKKGLLCQLFGGNALKLASGASFRGDINILLVGDPGTSKSQLLQYIHKLSPRGIYTSGRGSSAVGLTAYVTKDPETGETVLESGALVLSDRGICCIDEFDKMSDSARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSGSRYNPRLSVIDNIHLPPTLLSRFDLIYLILDKADEQTDRRLAKHIVSLHFDNPESLEQDVLDLSTLTDYVSYARKHIHPQLSDEAAEELTRGYVEIRKRGNFPGSSKKVITATPRQIESLIRLSEALARIRFSEWVEKHDVMEAFRLLEVAMQQSATDHSTGTIDMDLITTGVSASERMRRESLLQATRNIIMEKLQIGGPSMRLLELLEELKNQNTSSEIHLNDLRNAVSSLASEGFVTMHGDSVKRS* 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3385 832 Pfam MCM P-loop domain 410 632 IPR001208 GO:0003677|GO:0005524|GO:0032508
Aev04g3385 832 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 296 308 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Aev04g3385 832 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 736 745 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Aev04g3385 832 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 584 601 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Aev04g3385 832 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 245 258 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Aev04g3385 832 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 438 449 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Aev04g3385 832 Gene3D - 112 217 - -
Aev04g3385 832 SUPERFAMILY Nucleic acid-binding proteins 142 373 IPR012340 -
Aev04g3385 832 SMART mcm 219 736 IPR031327 GO:0003677|GO:0005524|GO:0032508
Aev04g3385 832 Gene3D - 250 302 - -
Aev04g3385 832 Coils Coil 792 812 - -
Aev04g3385 832 Pfam MCM AAA-lid domain 648 734 IPR041562 -
Aev04g3385 832 Pfam MCM OB domain 223 352 IPR033762 -
Aev04g3385 832 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 76 831 IPR031327 GO:0003677|GO:0005524|GO:0032508
Aev04g3385 832 MobiDBLite consensus disorder prediction 1 102 - -
Aev04g3385 832 PRINTS Mini-chromosome maintenance (MCM) protein family signature 523 537 IPR001208 GO:0003677|GO:0005524|GO:0032508
Aev04g3385 832 PRINTS Mini-chromosome maintenance (MCM) protein family signature 463 478 IPR001208 GO:0003677|GO:0005524|GO:0032508
Aev04g3385 832 PRINTS Mini-chromosome maintenance (MCM) protein family signature 575 587 IPR001208 GO:0003677|GO:0005524|GO:0032508
Aev04g3385 832 PRINTS Mini-chromosome maintenance (MCM) protein family signature 602 610 IPR001208 GO:0003677|GO:0005524|GO:0032508
Aev04g3385 832 PRINTS Mini-chromosome maintenance (MCM) protein family signature 551 564 IPR001208 GO:0003677|GO:0005524|GO:0032508
Aev04g3385 832 ProSiteProfiles MCM family domain profile. 422 628 IPR001208 GO:0003677|GO:0005524|GO:0032508
Aev04g3385 832 ProSitePatterns MCM family signature. 531 539 IPR018525 GO:0003677|GO:0005524|GO:0006260
Aev04g3385 832 Gene3D - 406 740 IPR027417 -
Aev04g3385 832 Gene3D - 741 827 IPR036388 -
Aev04g3385 832 PANTHER DNA REPLICATION LICENSING FACTOR MCM4 76 831 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Aev04g3385 832 MobiDBLite consensus disorder prediction 1 26 - -
Aev04g3385 832 CDD MCM4 425 734 - -
Aev04g3385 832 Pfam MCM N-terminal domain 121 213 IPR027925 -
Aev04g3385 832 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 433 748 IPR027417 -
Aev04g3385 832 Gene3D - 223 362 IPR012340 -
Aev04g3385 832 SMART AAA_5 464 614 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3385 Aev-Chr4 32570398 32575260 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3385 1 831 Core DNA Replication Machinery Family AT2G16440 73.969 0.0 1254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3385 K02212 - gmx:100782586 1426.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3385 04 32570398 32575260 Aev04g3385 04 32570398 32575260 ECH