Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3376 ATGAAAGAAGACAAAGTGACATATTTGAAAAAGTTCTCATCTTTCAAACATGTGAGGTCTAAGCTCAACAGTTTTATAGTGCCTCTCTGTTTTCTCAGTCATTTCTCATCAGATATGATGATGATGGAAAAGATAAATTTTTCTGAATTCATGTCAGAGCTAGTAGTTCTAGCAGATGAGGTTATTGCTTACTTTGATAAGAACACTGAAATTGAGATAGATGCTTTTACTGAGTTTGCCATGTTGGTTGAGAAATTGGTACCAATTTTCAATGATTTGAGGGACAAAGGCACAATCATGGACAAACCTTCCATTAGAAAATCATTGGAGTCTCTTAAGGTTGCCCTAAGCCGCGCTAAAGCTTTGACAAAAAGCAACAATTGGAAAGACCCCATCAAACAAATTGAGGACATAACACACGATATCGGTCGATCTTTAGGCCTAATCCTCGTGGCGAGCCTTGAAGTGTCCACAGATTTTAAAGAGGAGATTGGTACATTGCAAAAAGAGTTTATGAATGCAAGGTTTGTTGGGAATATGAGCATAGCTTCAAGTCCCATATCATCAGAGTTTGTCAATGATGTAACCATTGGAGGGGAAATTGAAATTGAAGAGGAAATACTTAATGTTACTATTGAAGATGTTGTTCTTCAACTTAAGAATGGTAATGATGAAGAGTTTGCAGTTGCACTTTTGAGACTAAAGAAATTCATCCAGGATGATGAACTGGATAGTTGTTTGGTTAATGAGGAAGCCGTTGTTGCTGTTCTTTTCAATCGTTTATGTTCATCTAAGGCAGACAATAGGCTGACAATTATTCAGTTGCTACGAAGTATTGCTTTGCGAAACGATAAGACAAAGGAGAAGATGACAGATACTGAGTTTTTATCAGCAGTTGTGAAGTCTCTTACAAGGGATGCGGATGAGAGGAGGGAAGCTGTGGGGCTGTTGCTAGAGCTCTCTGATCTTCCTGCAGTTCGACGACAGATCGGAAGAATTCAAGGGTGTATTGTTATGTTAGTTTCTATCCTTAATGAAAGCGACTCTGTCGCTTCGCAAGACGCAGCCAAGTTGTTGGATTTATTGTCTAGTAATACTCAAAATGCACTTCATATGGCTGAGGCTGGTTACTTTAAGCCATTAGTGCAGTATTTGAAGAAAGGCTCTGACATGAACAAGATCCTTATGGCAACAGCACTTTCTAGGTTGGTGCTTACTGATCACAGCAAACTTTCGCTCGGAAAAGACGGGGCGATTGAGCCCCTTGTCAACATGTTTCATACAGGAAAACTTGAGTCCAAGTTATCTGCTCTAAATGCATTGCAAAACCTTTCTAGCGTGACGGACAACGTGCAACTCTTGATCAGATCTGGAATTGCAGGATCTCTACTGCAGCTTCTTTTCTCAGTAACATCTGTGCTCATGACTCTTCGGGAGCCGGCATCTGCTATTCTAGCAAGAATTGCTCAGTCAGAATCCATTCTTGTCAATCAAGATGTGGCTCAGCAGATGCTCTCACTCTTGAACCTTTGCAGCCCGGTAATTCAAGGTCATCTGTTAGAAGCTCTAAACAGCATCGCTGCGCATCCTCGCGCATCCAAAGTGAGAAGAAAAATGAAGGAAAAAGGTGCACTTCAGCTAATATTACCCTTTCTGAAGGAAACTAACACTCAAATAAGAAGCAAAGCCCTTTGTTTGCTCTATACTCTCTCCAAAGATCTTACAGATGAGTTGAGTGAACATCTTGATGAAGCTCATCTTATTAACATTGTTAATATTGTCTCATCATCAACATCAGATAGTGAAAAAGCTGCTGCTGTCGGCATACTGAGTAATCTTCCTGTTAGTGATAAAAAGGTGACCGATGTGCTCAAGAAGGAAAATTTGTTGCCTATTTTAATATCCATTATGGATTCAGGCACAGGAAGTAGCACAACCACAACAAGTATCTTAGCTGAAAGTGTTGCGTGTGTTCTGATCCGGTTCACAAATTCCACTGACAAGAAACTACAGCTTTTTTCAGCTGAACATGGGGTGATTCCTTTGCTTGTAAAACTGCTCTCAAGCGGCTCAGCAATCACGAAATTTAGAGCCGCGACTGCATTGGCTCAACTGTCACAGAATTCTCTGTCTCTAAGGAGGTCTAGGAAGTCAAGGTGGTTGTGTATTAACCCCTCAGTGAATGCATATTGTGAAGTTCATGATGGCTATTGCTTTGTGAACACCACATTTTGTCTTGTCAAGGCAGGCGCTGTTTCGCCACTCATCAAGATACTTGAAGATAAGGAGTGGGAAGCAGTTGAGGCGGCACTGAGTGCCCTCTCAACTCTCTTGCAAGATGAAATATGGGAAGGCGGTGTCGATTGCTTAGCCAAAAACTCAGGTGTACAAGCTATTGTTAAAGTTCTAGAAGCAGGTGATGTGAAGGTTCAAGAAAAAGCACTGTGGATGTTGGAGAGAATATTCAAGGTCCAAGAGTACAGAGTAAAATATGGAGCATCAGCTCAGGTTTTTCTTATTGATCTGGCTCAGACTTGTGATTCTAGATTGAAGTCAACTGTTGCAAAAGTTTTGGCAGAGTTGGAGCTCCTGCAAGTTCAATCAAGTTATTTCTGA 2616 0.409 MKEDKVTYLKKFSSFKHVRSKLNSFIVPLCFLSHFSSDMMMMEKINFSEFMSELVVLADEVIAYFDKNTEIEIDAFTEFAMLVEKLVPIFNDLRDKGTIMDKPSIRKSLESLKVALSRAKALTKSNNWKDPIKQIEDITHDIGRSLGLILVASLEVSTDFKEEIGTLQKEFMNARFVGNMSIASSPISSEFVNDVTIGGEIEIEEEILNVTIEDVVLQLKNGNDEEFAVALLRLKKFIQDDELDSCLVNEEAVVAVLFNRLCSSKADNRLTIIQLLRSIALRNDKTKEKMTDTEFLSAVVKSLTRDADERREAVGLLLELSDLPAVRRQIGRIQGCIVMLVSILNESDSVASQDAAKLLDLLSSNTQNALHMAEAGYFKPLVQYLKKGSDMNKILMATALSRLVLTDHSKLSLGKDGAIEPLVNMFHTGKLESKLSALNALQNLSSVTDNVQLLIRSGIAGSLLQLLFSVTSVLMTLREPASAILARIAQSESILVNQDVAQQMLSLLNLCSPVIQGHLLEALNSIAAHPRASKVRRKMKEKGALQLILPFLKETNTQIRSKALCLLYTLSKDLTDELSEHLDEAHLINIVNIVSSSTSDSEKAAAVGILSNLPVSDKKVTDVLKKENLLPILISIMDSGTGSSTTTTSILAESVACVLIRFTNSTDKKLQLFSAEHGVIPLLVKLLSSGSAITKFRAATALAQLSQNSLSLRRSRKSRWLCINPSVNAYCEVHDGYCFVNTTFCLVKAGAVSPLIKILEDKEWEAVEAALSALSTLLQDEIWEGGVDCLAKNSGVQAIVKVLEAGDVKVQEKALWMLERIFKVQEYRVKYGASAQVFLIDLAQTCDSRLKSTVAKVLAELELLQVQSSYF* 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3376 871 Pfam Armadillo/beta-catenin-like repeat 676 706 IPR000225 GO:0005515
Aev04g3376 871 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 417 459 IPR000225 GO:0005515
Aev04g3376 871 Gene3D - 534 722 IPR011989 -
Aev04g3376 871 Gene3D - 736 866 IPR011989 -
Aev04g3376 871 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 39 871 - -
Aev04g3376 871 SMART arm_5 667 707 IPR000225 GO:0005515
Aev04g3376 871 SMART arm_5 406 446 IPR000225 GO:0005515
Aev04g3376 871 SMART arm_5 283 322 IPR000225 GO:0005515
Aev04g3376 871 SMART arm_5 739 779 IPR000225 GO:0005515
Aev04g3376 871 SMART arm_5 783 823 IPR000225 GO:0005515
Aev04g3376 871 SMART arm_5 532 572 IPR000225 GO:0005515
Aev04g3376 871 SMART arm_5 365 405 IPR000225 GO:0005515
Aev04g3376 871 PANTHER ARMADILLO REPEAT-CONTAINING PROTEIN-LIKE 39 871 - -
Aev04g3376 871 SUPERFAMILY ARM repeat 211 468 IPR016024 -
Aev04g3376 871 SUPERFAMILY ARM repeat 395 825 IPR016024 -
Aev04g3376 871 Gene3D - 205 533 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3376 Aev-Chr4 32514442 32517906 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3376 253 871 U-box Gene Family AT1G76390 28.852 4.63e-47 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3376 K08332 - gmx:100791453 1162.13