Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3368 ATGGCTCCAAAGAAGGATAAGGCTCCTCCACCTTCCTCCAAGCCCGCCAAATCTGGTGGTGGCAAGCAGAAGAAAAAGAAGTGGAGTAAGGGAAAGCAAAAGGAGAAGGTGAACAACCAGGTGCTGTTTGATCAGGCTACATATGACAAGCTCCTCTCTGAAGCACCCAAATTCAAGCTCATCACTCCTTCCATCCTCTCTGATCGTTTGAGGGTACCACTTTTTGTTCCTTCTTGA 237 0.4768 MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNQVLFDQATYDKLLSEAPKFKLITPSILSDRLRVPLFVPS* 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3368 78 Pfam S25 ribosomal protein 7 72 IPR004977 -
Aev04g3368 78 PANTHER 40S RIBOSOMAL PROTEIN S25 2 72 IPR004977 -
Aev04g3368 78 Gene3D - 21 76 - -
Aev04g3368 78 MobiDBLite consensus disorder prediction 1 36 - -
Aev04g3368 78 PANTHER BNAA04G12260D PROTEIN 2 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3368 Aev-Chr4 32440047 32440580 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3368 1 72 Cytoplasmic Ribosomal Protein Gene Family AT4G34555 95.833 2.99e-30 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3368 K02975 - gmx:548053 92.8189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3368 04 32440047 32440580 Aev04g3368 04 32440047 32440580 ECH