Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3354 ATGTTGCATTGTCTTAACAGTTCGGGTAATGTAGGAGGATCGAGCTGTTCCGACATGACAGTGTTGGAGAGGCAAAGGGCAAGGAAAAGATGGCAACAAGAAGAACAGGGTAACCAAGAACACTACTACCAGCATGAGCAGCAGCAGCAGCAACAAGGCTTGTTTTGCGGAACAGAGTATAGCGATGATGTGTTCTGTTCATCCTTGAATCCTCAGGGGACGATGATGATGATGGTGATGATGGGCGGTGGTGGTGATTCCAAACTTGAGAATATGGCATTTGGGTCCTGTTCATCTTCTGGGGGGTTTGATTTGAGTTCTGTAGTTTCAAGAACATGTAGCAGAGAATTGTTGGTCTCATCCACAGAGAAAACGAGAGAAAGCTCTAAGAAGCGGAAGCCTGAGAATCCAAAGCAGGTTGTTGTGGAAAATGATGGGAAGGAGAAGAGGGTGAAAAAGAGTGGTGGTGAAGAAGAATCGTCAAAAGTAACAGAGCAAAACAACAAGAAGAACAAGAATAATGCGAAATCAAGCAGTAGTAAAAGCAACAAGGAAACCTCTGAGGAGAATTCAAAAGGGTCAGAGGTTCAGAATCAGAAGCCAGATTACATTCATGTCCGAGCACGTCGTGGCCAAGCCACTGATAGTCACAGCTTAGCCGAAAGAGTTAGGAGGGAAAAGATTAGCGAGAGAATGAAGTATTTGCAAGATTTGGTGCCAGGGTGTAACAAAATCACAGGAAAAGCTGGAATGCTTGATGAAATCATTAACTATGTTCAGTCCCTTCAAAAACAAGTTGAGTTCTTGTCTATGAAATTAGCTGCTGTAAACCCAAGGCTTGACTTCAACATTGATGATCTCTTTGCCAAAGAGGTGTTTCCTACATGTAATCCAAGTTTTCCAAGCATAGGAATGGCATCATCAGAGATTGTTAACCCTGCAGCATATCTTGAATTCAACTCAGTACAGCAGCAACAACAGCAACAGCTAGTTTCATGTTGTGGTGGATTAATGAATAACATGGTGATGAACCCTTCAGAGATGGTGCTTAGAAGGACCACTAGTGCTCCTGTGTCATCTTTTCCAGAAACATTTATTGACTCTTCATCATCATCTTGTTTCACTCAAATTTTACCACCCTCAGCTTGGGAAGGTGATTTCCAAGTCCAAAACCTTTACAATAATGTGGCTTTTGATCAAGTGAGAACATCACCTTTTCCTTCTCAGCCATTTACAGGTTTAGTGGAAGCTAGCAATATGAAGATGGAGATGTAG 1275 0.4243 MLHCLNSSGNVGGSSCSDMTVLERQRARKRWQQEEQGNQEHYYQHEQQQQQQGLFCGTEYSDDVFCSSLNPQGTMMMMVMMGGGGDSKLENMAFGSCSSSGGFDLSSVVSRTCSRELLVSSTEKTRESSKKRKPENPKQVVVENDGKEKRVKKSGGEEESSKVTEQNNKKNKNNAKSSSSKSNKETSEENSKGSEVQNQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQKQVEFLSMKLAAVNPRLDFNIDDLFAKEVFPTCNPSFPSIGMASSEIVNPAAYLEFNSVQQQQQQQLVSCCGGLMNNMVMNPSEMVLRRTTSAPVSSFPETFIDSSSSSCFTQILPPSAWEGDFQVQNLYNNVAFDQVRTSPFPSQPFTGLVEASNMKMEM* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3354 424 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 20 404 IPR024097 GO:0006355
Aev04g3354 424 MobiDBLite consensus disorder prediction 119 203 - -
Aev04g3354 424 MobiDBLite consensus disorder prediction 167 181 - -
Aev04g3354 424 PANTHER TRANSCRIPTION FACTOR BHLH63-LIKE 20 404 - -
Aev04g3354 424 Gene3D - 209 283 IPR036638 GO:0046983
Aev04g3354 424 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 210 281 IPR036638 GO:0046983
Aev04g3354 424 MobiDBLite consensus disorder prediction 120 166 - -
Aev04g3354 424 CDD bHLH_AtBPE_like 202 287 - -
Aev04g3354 424 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 212 262 IPR011598 GO:0046983
Aev04g3354 424 Pfam Helix-loop-helix DNA-binding domain 216 263 IPR011598 GO:0046983
Aev04g3354 424 SMART finulus 218 268 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3354 Aev-Chr4 32367632 32370573 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3354 9 397 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 38.756 3.54e-65 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev04g3354 HLH 2.4e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3354 - - gsj:114373950 393.66