Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3353 ATGGCATCAAGCTCTATGAGCAAAGAAAAGGGTAGTGAGTCAACATGGACAGCAAAACAGAACAAGCTGTTTGAGAAGGCACTTGCAAAATATGATAAGGAGACACCAGAGAGGTGGCAAAATGTGGCCAAAGCTGTTGGTGGAAAATCTGCTGATGAAGTTAAGAGACACTATGAGATCCTCTTGGAAGATCTCAGACACATTGAATCTGGCCGTGTCCCTATTCCTAATTACAAGTCCACTCCAAGAACCACCACTAATCTTGATGAAGAAGAGAGGTCATTTCCCTAA 291 0.4296 MASSSMSKEKGSESTWTAKQNKLFEKALAKYDKETPERWQNVAKAVGGKSADEVKRHYEILLEDLRHIESGRVPIPNYKSTPRTTTNLDEEERSFP* 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3353 96 ProSiteProfiles SANT domain profile. 11 66 IPR017884 -
Aev04g3353 96 PANTHER PROTEIN RADIALIS-LIKE 3 1 81 - -
Aev04g3353 96 CDD SANT 15 62 IPR001005 -
Aev04g3353 96 ProSiteProfiles Myb-like domain profile. 8 62 IPR001005 -
Aev04g3353 96 SUPERFAMILY Homeodomain-like 14 70 IPR009057 -
Aev04g3353 96 Gene3D - 6 75 - -
Aev04g3353 96 SMART sant 12 64 IPR001005 -
Aev04g3353 96 MobiDBLite consensus disorder prediction 72 96 - -
Aev04g3353 96 Pfam Myb-like DNA-binding domain 14 58 IPR001005 -
Aev04g3353 96 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 81 IPR044636 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3353 Aev-Chr4 32347672 32347962 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aev04g3353 Myb_DNA-binding 2.3e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3353 - - gmx:100798314 159.073